RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 HTR3DQ70Z44 454 aa22.43■■□□□ 1.18
CSNK1D-216ENST00000581108 SCD5Q86SK9 330 aa22.43■■□□□ 1.18
CSNK1D-216ENST00000581108 ELOA2Q8IYF1 753 aaPredicted RBP22.43■■□□□ 1.18
CSNK1D-216ENST00000581108 SLC35C1Q96A29 364 aa22.43■■□□□ 1.18
CSNK1D-216ENST00000581108 DUSP9Q99956 384 aaKnown RBP22.43■■□□□ 1.18
CSNK1D-216ENST00000581108 ARHGEF4Q9NR80 690 aa22.43■■□□□ 1.18
CSNK1D-216ENST00000581108 SPHK2Q9NRA0 654 aa22.43■■□□□ 1.18
CSNK1D-216ENST00000581108 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.43■■□□□ 1.18
CSNK1D-216ENST00000581108 NAGPAQ9UK23 515 aa22.43■■□□□ 1.18
CSNK1D-216ENST00000581108 PSMA7O14818 248 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 MDM4O15151 490 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 GADD45BO75293 160 aaPredicted RBP22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 DGKEP52429 567 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 MRPS21P82921 87 aaKnown RBP22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 STIM1Q13586 685 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 CSRP2Q16527 193 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 ANO4Q32M45 955 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 CCDC186Q7Z3E2 898 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 PHTF2Q8N3S3 785 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 TSTD1Q8NFU3 115 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 DHTKD1Q96HY7 919 aaPredicted RBP22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 MMP17Q9ULZ9 603 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 USP3Q9Y6I4 520 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 ABCA7Q8IZY2 2146 aa22.42■■□□□ 1.18
CSNK1D-216ENST00000581108 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 DCLK1O15075 740 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 HOXC11O43248 304 aaPredicted RBP22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 CHRM1P11229 460 aaPredicted RBP22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 BMP6P22004 513 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 TIE1P35590 1138 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 GRIA2P42262 883 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 ATXN1P54253 815 aaKnown RBP22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 LRMPQ12912 555 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 CUL2Q13617 745 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 C10orf120Q5SQS8 335 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 BTBD8Q5XKL5 378 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 ARHGAP17Q68EM7 881 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 ETFBKMTQ8IXQ9 262 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 ALLCQ8N6M5 410 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 ZC3H10Q96K80 434 aaKnown RBP22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 ARRDC1-AS1Q9H2J1 176 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 FAM124BQ9H5Z6 455 aaPredicted RBP22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 ZDHHC4Q9NPG8 344 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 DNMT3LQ9UJW3 386 aa22.41■■□□□ 1.18
CSNK1D-216ENST00000581108 TULP3O75386 442 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 KLF8O95600 359 aaPredicted RBP22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 SDHBP21912 280 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 TNFRSF4P43489 277 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 KIR2DL1P43626 348 aaPredicted RBP22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 PLA2G4AP47712 749 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 PSEN1P49768 467 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 CCDC6Q16204 474 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 CRY1Q16526 586 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 KLHL10Q6JEL2 608 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 KLHDC10Q6PID8 442 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 TMEM92Q6UXU6 159 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 PRR23CQ6ZRP0 262 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 PIGZQ86VD9 579 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 IL17RCQ8NAC3 791 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 ANKRD52Q8NB46 1076 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 TXNDC5Q8NBS9 432 aaKnown RBP22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 LOXL4Q96JB6 756 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 TPSD1Q9BZJ3 242 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 UBXN6Q9BZV1 441 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 METTL14Q9HCE5 456 aaKnown RBP22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 DEC1Q9P2X7 70 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 CDV3Q9UKY7 258 aaKnown RBP22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 INVSQ9Y283 1065 aa22.4■■□□□ 1.18
CSNK1D-216ENST00000581108 TBC1D3BA6NDS4 549 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 PPP1R3GB7ZBB8 358 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 SGK1O00141 431 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 TRIM24O15164 1050 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 HNRNPLP14866 589 aaKnown RBP eCLIP22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 FMO5P49326 533 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 GOLGA8FQ08AF8 430 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 GOLGA8DPQ0D2H9 430 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 PLK5Q496M5 336 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 ANO7Q6IWH7 933 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 TTC30AQ86WT1 665 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 ZNF276Q8N554 614 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 CEP63Q96MT8 703 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 DUSP15Q9H1R2 295 aaPredicted RBP22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 CLIC5Q9NZA1 410 aa22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 LSM7Q9UK45 103 aaKnown RBP22.39■■□□□ 1.17
CSNK1D-216ENST00000581108 THADAQ6YHU6 1953 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 SPTBN2O15020 2390 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 MED19A0JLT2 244 aaPredicted RBP22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 BIN1O00499 593 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 GDF9O60383 454 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 EPN2O95208 641 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 RALAP11233 206 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 PPP1R2P41236 205 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 MORC3Q14149 939 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 GOLGA7BQ2TAP0 167 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 CCDC40Q4G0X9 1142 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 RAB41Q5JT25 222 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 TTI2Q6NXR4 508 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 TPGS1Q6ZTW0 290 aa22.38■■□□□ 1.17
CSNK1D-216ENST00000581108 RASSF3Q86WH2 238 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms