RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 KDSRQ06136 332 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 EDRF1Q3B7T1 1238 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 EOGTQ5NDL2 527 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 PHTF2Q8N3S3 785 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 XXYLT1Q8NBI6 393 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 ABCB6Q9NP58 842 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 C2CD2Q9Y426 696 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 PLXNB3Q9ULL4 1909 aa20.57■□□□□ 0.88
LIMD2-209ENST00000580222 AP5Z1O43299 807 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 CBFA2T3O75081 653 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 RPL13P26373 211 aaKnown RBP20.56■□□□□ 0.88
LIMD2-209ENST00000580222 DPP6P42658 865 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 HNRNPDQ14103 355 aaKnown RBP20.56■□□□□ 0.88
LIMD2-209ENST00000580222 NFIL3Q16649 462 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 INTS6LQ5JSJ4 861 aaKnown RBP20.56■□□□□ 0.88
LIMD2-209ENST00000580222 LMBRD2Q68DH5 695 aaPredicted RBP20.56■□□□□ 0.88
LIMD2-209ENST00000580222 ANKRD40Q6AI12 368 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 NAXDQ8IW45 347 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 SCN4BQ8IWT1 228 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 ZSWIM2Q8NEG5 633 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 SPATA18Q8TC71 538 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 ERLEC1Q96DZ1 483 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 ACBD6Q9BR61 282 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 GZF1Q9H116 711 aaPredicted RBP20.56■□□□□ 0.88
LIMD2-209ENST00000580222 ASB7Q9H672 318 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 KIAA1586Q9HCI6 787 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 CD93Q9NPY3 652 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 SCUBE2Q9NQ36 999 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 DDX43Q9NXZ2 648 aaKnown RBP20.56■□□□□ 0.88
LIMD2-209ENST00000580222 CALCOCO1Q9P1Z2 691 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 RWDD2AQ9UIY3 292 aa20.56■□□□□ 0.88
LIMD2-209ENST00000580222 ZNF638Q14966 1978 aaKnown RBP20.55■□□□□ 0.88
LIMD2-209ENST00000580222 IGHV1OR15-9A0A0B4J2B8 117 aa20.55■□□□□ 0.88
LIMD2-209ENST00000580222 TULP1O00294 542 aaPredicted RBP20.55■□□□□ 0.88
LIMD2-209ENST00000580222 BYSLQ13895 437 aaKnown RBP20.55■□□□□ 0.88
LIMD2-209ENST00000580222 CEP135Q66GS9 1140 aa20.55■□□□□ 0.88
LIMD2-209ENST00000580222 TTI2Q6NXR4 508 aa20.55■□□□□ 0.88
LIMD2-209ENST00000580222 CRELD2Q6UXH1 353 aaPredicted RBP20.55■□□□□ 0.88
LIMD2-209ENST00000580222 C11orf57Q6ZUT1 292 aaPredicted RBP20.55■□□□□ 0.88
LIMD2-209ENST00000580222 TOGARAM2Q6ZUX3 1019 aa20.55■□□□□ 0.88
LIMD2-209ENST00000580222 MIB1Q86YT6 1006 aa20.55■□□□□ 0.88
LIMD2-209ENST00000580222 SLC9A9Q8IVB4 645 aa20.55■□□□□ 0.88
LIMD2-209ENST00000580222 ARHGEF4Q9NR80 690 aa20.55■□□□□ 0.88
LIMD2-209ENST00000580222 SMPD4Q9NXE4 827 aa20.55■□□□□ 0.88
LIMD2-209ENST00000580222 EIF4E1BA6NMX2 242 aaKnown RBP20.54■□□□□ 0.88
LIMD2-209ENST00000580222 CETN3O15182 167 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 ATP2C2O75185 946 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 C1QL1O75973 258 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 APODP05090 189 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 GRIA2P42262 883 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 WASP42768 502 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 SLC14A1Q13336 389 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 ADAM9Q13443 819 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 TPD52L1Q16890 204 aaPredicted RBP20.54■□□□□ 0.88
LIMD2-209ENST00000580222 SV2CQ496J9 727 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 HSF5Q4G112 596 aaPredicted RBP20.54■□□□□ 0.88
LIMD2-209ENST00000580222 CT47A1Q5JQC4 288 aaPredicted RBP20.54■□□□□ 0.88
LIMD2-209ENST00000580222 CBWD2Q8IUF1 395 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 BRSK2Q8IWQ3 736 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 RDH13Q8NBN7 331 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 HSPA12BQ96MM6 686 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 CD248Q9HCU0 757 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 DMAC2Q9NW81 257 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 RBAKQ9NYW8 714 aaPredicted RBP20.54■□□□□ 0.88
LIMD2-209ENST00000580222 FRMD4BQ9Y2L6 1034 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 PCDHB9Q9Y5E1 797 aa20.54■□□□□ 0.88
LIMD2-209ENST00000580222 A0A1W2PQF6 199 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 ZNF233A6NK53 670 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 TRIM24O15164 1050 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 MAOBP27338 520 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 ERCC5P28715 1186 aaPredicted RBP20.53■□□□□ 0.88
LIMD2-209ENST00000580222 TNFRSF4P43489 277 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 FKBP3Q00688 224 aaKnown RBP20.53■□□□□ 0.88
LIMD2-209ENST00000580222 SNRNP35Q16560 246 aaKnown RBP20.53■□□□□ 0.88
LIMD2-209ENST00000580222 ANO6Q4KMQ2 910 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 FOXR2Q6PJQ5 311 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 CSGALNACT2Q8N6G5 542 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 CXorf38Q8TB03 319 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 TMEM174Q8WUU8 243 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 FUCA2Q9BTY2 467 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 CPQQ9Y646 472 aa20.53■□□□□ 0.88
LIMD2-209ENST00000580222 URB1O60287 2271 aaKnown RBP20.52■□□□□ 0.88
LIMD2-209ENST00000580222 SYPP08247 313 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 CASP4P49662 377 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 SLC7A9P82251 487 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 CYP4F3Q08477 520 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 PLEKHG6Q3KR16 790 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 CFAP221Q4G0U5 840 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 SLC36A4Q6YBV0 504 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 NAT16Q8N8M0 369 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 EEF2KMTQ96G04 330 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 DUSP9Q99956 384 aaKnown RBP20.52■□□□□ 0.88
LIMD2-209ENST00000580222 NAT10Q9H0A0 1025 aaKnown RBP20.52■□□□□ 0.88
LIMD2-209ENST00000580222 SLC6A17Q9H1V8 727 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 IL21RQ9HBE5 538 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 TOR4AQ9NXH8 423 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 CFAP97Q9P2B7 532 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 PCOLCE2Q9UKZ9 415 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 CYP8B1Q9UNU6 501 aa20.52■□□□□ 0.88
LIMD2-209ENST00000580222 ZNF840PA6NDX5 716 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms