RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 GJA5P36382 358 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 NOMO1Q15155 1222 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 NLRP9Q7RTR0 991 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 PYROXD2Q8N2H3 581 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 ZNF276Q8N554 614 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 BANPQ8N9N5 519 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 OR6B3Q8NGW1 331 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 SNRNP25Q9BV90 132 aaKnown RBP10.91□□□□□ -0.66
TOP3A-209ENST00000580095 RNF181Q9P0P0 153 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 WDR35Q9P2L0 1181 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 NKX1-2Q9UD57 310 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-209ENST00000580095 USH1CQ9Y6N9 552 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 CYB561D2O14569 222 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 MAGEB2O15479 319 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 PAPSS1O43252 624 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-209ENST00000580095 MCF2P10911 925 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 ZNF200P98182 395 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-209ENST00000580095 WLSQ5T9L3 541 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 ARMC3Q5W041 872 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 BSPRYQ5W0U4 402 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 TRMT10BQ6PF06 316 aaKnown RBP10.91□□□□□ -0.66
TOP3A-209ENST00000580095 TTC7BQ86TV6 843 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 CDCA5Q96FF9 252 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 CYTH2Q99418 400 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 MPHOSPH6Q99547 160 aaKnown RBP10.91□□□□□ -0.66
TOP3A-209ENST00000580095 DHX35Q9H5Z1 703 aaKnown RBP10.91□□□□□ -0.66
TOP3A-209ENST00000580095 GOLGA2P5Q9HBQ8 144 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 CFAP69A5D8W1 941 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 TRIM49D1C9J1S8 452 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 E7ESA3 106 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 H3BRB1 525 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 AP1G2O75843 785 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 ZBED1O96006 694 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 GM2AP17900 193 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 IGFBP6P24592 240 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-209ENST00000580095 LMO2P25791 158 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 ADORA2AP29274 412 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 SLC8A1P32418 973 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 GABRB2P47870 512 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 YWHAZP63104 245 aaKnown RBP10.9□□□□□ -0.66
TOP3A-209ENST00000580095 RBP5P82980 135 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 SLC10A2Q12908 348 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-209ENST00000580095 KCNJ11Q14654 390 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 ANKRD13AQ8IZ07 590 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 KHSRPQ92945 711 aaKnown RBP eCLIP10.9□□□□□ -0.663e-7■■■■□ 22.5
TOP3A-209ENST00000580095 LENG1Q96BZ8 264 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-209ENST00000580095 TUT1Q9H6E5 874 aaKnown RBP10.9□□□□□ -0.66
TOP3A-209ENST00000580095 MANSC1Q9H8J5 431 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 PLAC1Q9HBJ0 212 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 PCDH18Q9HCL0 1135 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 SMYD2Q9NRG4 433 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 ETNK2Q9NVF9 386 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 IL1RAPL1Q9NZN1 696 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 CACNG4Q9UBN1 327 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 MARCOQ9UEW3 520 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-209ENST00000580095 TEX264Q9Y6I9 313 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 E2F8A0AVK6 867 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 METTL18O95568 372 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 P4HA1P13674 534 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 CCNB1P14635 433 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 GMPRP36959 345 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 KLHL38Q2WGJ6 581 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 TAPT1Q6NXT6 567 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 MTHFD1LQ6UB35 978 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 LCLAT1Q6UWP7 414 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 OLFML1Q6UWY5 402 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 GRAMD1AQ96CP6 724 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 DHRS4Q9BTZ2 278 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 NXF3Q9H4D5 531 aaKnown RBP10.9□□□□□ -0.66
TOP3A-209ENST00000580095 SENP1Q9P0U3 644 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 ARMCX1Q9P291 453 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 ZC3H7BQ9UGR2 993 aaKnown RBP10.9□□□□□ -0.66
TOP3A-209ENST00000580095 EFR3BQ9Y2G0 817 aa10.9□□□□□ -0.66
TOP3A-209ENST00000580095 SIP14410 1827 aa10.9□□□□□ -0.67
TOP3A-209ENST00000580095 SPDYE5A6NIY4 337 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 KITP10721 976 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 SDC4P31431 198 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 HDAC4P56524 1084 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 ACVR2BQ13705 512 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 TBC1D25Q3MII6 688 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 MDH1BQ5I0G3 518 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 MARCH8Q5T0T0 291 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 MROH9Q5TGP6 573 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 MAMDC4Q6UXC1 1216 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 CAND1Q86VP6 1230 aaKnown RBP10.89□□□□□ -0.67
TOP3A-209ENST00000580095 LONP2Q86WA8 852 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 KLHL23Q8NBE8 558 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 TTC8Q8TAM2 541 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 SLC7A6OSQ96CW6 309 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-209ENST00000580095 OSMRQ99650 979 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 C16orf70Q9BSU1 422 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 TBC1D10AQ9BXI6 508 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 TRIM6Q9C030 488 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-209ENST00000580095 ASB7Q9H672 318 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 GBA2Q9HCG7 927 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-209ENST00000580095 ADARB2Q9NS39 739 aaKnown RBP10.89□□□□□ -0.67
TOP3A-209ENST00000580095 HEY2Q9UBP5 337 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 ZFP69BQ9UJL9 534 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 APOL1O14791 398 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 ENTPD5O75356 428 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms