RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 TRIM9Q9C026 710 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 MKRN2Q9H000 416 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 IKZF4Q9H2S9 585 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CRTAC1Q9NQ79 661 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 USP36Q9P275 1121 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CHORDC1Q9UHD1 332 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 STON1Q9Y6Q2 735 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ENC1O14682 589 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 COCHO43405 550 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 BRINP1O60477 761 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 OXTRP30559 389 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CCT8P50990 548 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 RTP5Q14D33 572 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TEAD4Q15561 434 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SOWAHAQ2M3V2 549 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PRAMEF14Q5SWL7 426 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 HES3Q5TGS1 186 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CRELD2Q6UXH1 353 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 HS2ST1Q7LGA3 356 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 METTL3Q86U44 580 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TMPRSS6Q8IU80 811 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CCDC83Q8IWF9 413 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 C1orf127Q8N9H9 656 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 C1orf216Q8TAB5 229 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 BHMTQ93088 406 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SIPA1Q96FS4 1042 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SLITRK1Q96PX8 696 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 LGMNQ99538 433 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 NUP58Q9BVL2 599 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 BBS2Q9BXC9 721 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 FOXP1Q9H334 677 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CPNE5Q9HCH3 593 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 LIMCH1Q9UPQ0 1083 aa14.02□□□□□ -0.17
CDK5RAP3-213ENST00000579605 MUC22E2RYF6 1773 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GABRDO14764 452 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TRAK2O60296 914 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 FAM13AO94988 1023 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 LDOC1O95751 146 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ACADMP11310 421 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 C6P13671 934 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TYRP14679 529 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ACTN2P35609 894 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 WNT7BP56706 349 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 RHDQ02161 417 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 DTHD1Q6ZMT9 781 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PRICKLE2Q7Z3G6 844 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GATAD2AQ86YP4 633 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TOP6BLQ8N6T0 577 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PRCCQ92733 491 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 REEP2Q9BRK0 252 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 LLPHQ9BRT6 129 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 NRSN2Q9GZP1 204 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TM9SF3Q9HD45 589 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 DACH1Q9UI36 760 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CDH9Q9ULB4 789 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 NOL7Q9UMY1 257 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 MYOFQ9NZM1 2061 aa14.01□□□□□ -0.17
CDK5RAP3-213ENST00000579605 MYO18AQ92614 2054 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ANAPC1Q9H1A4 1944 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GFRA2O00451 464 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PCDHGA12O60330 932 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 RFPL3O75679 317 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 IL18RAPO95256 599 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 DGKGP49619 791 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 NOP14P78316 857 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 INAVAQ3KP66 663 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 MDH1BQ5I0G3 518 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 KCNT1Q5JUK3 1230 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 HECTD3Q5T447 861 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SLFN12LQ6IEE8 588 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 FAM184AQ8NB25 1140 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CACTINQ8WUQ7 758 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 POMGNT1Q8WZA1 660 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 IGSF8Q969P0 613 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PCED1BQ96HM7 432 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CDK5RAP3Q96JB5 506 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CNDP2Q96KP4 475 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 FAM213AQ9BRX8 229 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TRIM4Q9C037 500 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 NACA2Q9H009 215 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 C6orf106Q9H6K1 298 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CCSER2Q9H7U1 834 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GDAP2Q9NXN4 497 aa14□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PTPRQQ9UMZ3 2332 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SYNCRIPO60506 623 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 KRT18P05783 430 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 YWHAQP27348 245 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CACNA2D1P54289 1103 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 HMGN5P82970 282 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 RBP5P82980 135 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 MAPRE1Q15691 268 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 BROXQ5VW32 411 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ADAT2Q7Z6V5 191 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GPBP1Q86WP2 473 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 NT5DC4Q86YG4 428 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 LRRC52Q8N7C0 313 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ZSWIM2Q8NEG5 633 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 NOC3LQ8WTT2 800 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 FBXO32Q969P5 355 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 WBP1Q96G27 269 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms