RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ULBP1Q9BZM6 244 aa6.88□□□□□ -1.31
TRAF4-213ENST00000578917 DCLK3Q9C098 648 aa6.88□□□□□ -1.31
TRAF4-213ENST00000578917 SYNCQ9H7C4 482 aa6.88□□□□□ -1.31
TRAF4-213ENST00000578917 NMUR1Q9HB89 426 aa6.88□□□□□ -1.31
TRAF4-213ENST00000578917 HPS4Q9NQG7 708 aa6.88□□□□□ -1.31
TRAF4-213ENST00000578917 OLA1Q9NTK5 396 aaKnown RBP6.88□□□□□ -1.31
TRAF4-213ENST00000578917 RBM12Q9NTZ6 932 aaKnown RBP6.88□□□□□ -1.31
TRAF4-213ENST00000578917 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAF4-213ENST00000578917 CLIC5Q9NZA1 410 aa6.88□□□□□ -1.31
TRAF4-213ENST00000578917 MARCH2Q9P0N8 246 aa6.88□□□□□ -1.31
TRAF4-213ENST00000578917 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAF4-213ENST00000578917 SLC8A2Q9UPR5 921 aa6.88□□□□□ -1.31
TRAF4-213ENST00000578917 CEP83Q9Y592 693 aa6.88□□□□□ -1.31
TRAF4-213ENST00000578917 PTPRZ1P23471 2315 aaPredicted RBP6.88□□□□□ -1.31
TRAF4-213ENST00000578917 ANK1P16157 1881 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 RIF1Q5UIP0 2472 aaKnown RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 SLC12A8A0AV02 714 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 TBC1D3BA6NDS4 549 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 SMTNL1A8MU46 457 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 TULP2O00295 520 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 FOXN3O00409 490 aaPredicted RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 TRDMT1O14717 391 aaKnown RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 MDM4O15151 490 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 SART1O43290 800 aaKnown RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 FBXO21O94952 628 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 OLFM2O95897 454 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 CYBBP04839 570 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 SP9P0CG40 484 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 CHRNB1P11230 501 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 ADH5P11766 374 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 TCF3P15923 654 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 ACADSBP45954 432 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 SEC13P55735 322 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 TPM4P67936 248 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 ZXDBP98169 803 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 UBXN1Q04323 297 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 GAD2Q05329 585 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 TYRO3Q06418 890 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 USP4Q13107 963 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 ANO6Q4KMQ2 910 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 FILIP1LQ4L180 1135 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 RAB41Q5JT25 222 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 LY6G5CQ5SRR4 150 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 BSPRYQ5W0U4 402 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 PM20D1Q6GTS8 502 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 PMF1Q6P1K2 205 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 KLHDC10Q6PID8 442 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 RHBDF2Q6PJF5 856 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 TSSK4Q6SA08 328 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 TPGS1Q6ZTW0 290 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 C11orf57Q6ZUT1 292 aaPredicted RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 HTR3DQ70Z44 454 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 SCD5Q86SK9 330 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 ALYREFQ86V81 257 aaKnown RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 TMEM25Q86YD3 366 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 BBS7Q8IWZ6 715 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 SPEM1Q8N4L4 309 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 UBR7Q8N806 425 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 KIAA1958Q8N8K9 716 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 NAT16Q8N8M0 369 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 RIN3Q8TB24 985 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 SLC35F5Q8WV83 523 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 ZNF606Q8WXB4 792 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 KCTD13Q8WZ19 329 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 NDRG1Q92597 394 aaKnown RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 BHMTQ93088 406 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 FAM149B1Q96BN6 582 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 OTUB2Q96DC9 234 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 CHFRQ96EP1 664 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 HSFY1Q96LI6 401 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 XPO6Q96QU8 1125 aaKnown RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 PNKPQ96T60 521 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 HINFPQ9BQA5 517 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 IER2Q9BTL4 223 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 LSM14BQ9BX40 385 aaKnown RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 KLF16Q9BXK1 252 aaPredicted RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 CHRDQ9H2X0 955 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 CYLDQ9NQC7 956 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 CNGB3Q9NQW8 809 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 ABCC13Q9NSE7 274 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 FAM207AQ9NSI2 230 aaPredicted RBP6.87□□□□□ -1.31
TRAF4-213ENST00000578917 OSER1Q9NX31 292 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 DLGAP2Q9P1A6 1054 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 WDR35Q9P2L0 1181 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 DEC1Q9P2X7 70 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 FBXO4Q9UKT5 387 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 ZNF510Q9Y2H8 683 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 USP3Q9Y6I4 520 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 R4GN57 208 aa6.87□□□□□ -1.31
TRAF4-213ENST00000578917 YJEFN3A6XGL0 299 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.86□□□□□ -1.31
TRAF4-213ENST00000578917 E7ENQ6 273 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 NEDD8-MDP1E9PL57 170 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 ZBTB24O43167 697 aaPredicted RBP6.86□□□□□ -1.31
TRAF4-213ENST00000578917 RNF40O75150 1001 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 EGFP01133 1207 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 APODP05090 189 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 CYP17A1P05093 508 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 NCAM1P13591 858 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 CORO1AP31146 461 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms