RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ANO4Q32M45 955 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 CBWD6Q4V339 395 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 DCAF17Q5H9S7 520 aaPredicted RBP16.74■□□□□ 0.27
CRLF3-203ENST00000578692 CBWD3Q5JTY5 395 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 CBWD5Q5RIA9 395 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 EMC10Q5UCC4 262 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 TMEM25Q86YD3 366 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 SFTPA1Q8IWL2 248 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 SLC4A11Q8NBS3 891 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 FAM124BQ9H5Z6 455 aaPredicted RBP16.74■□□□□ 0.27
CRLF3-203ENST00000578692 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.74■□□□□ 0.27
CRLF3-203ENST00000578692 NUDT5Q9UKK9 219 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 COQ4Q9Y3A0 265 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 USP3Q9Y6I4 520 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 MED19A0JLT2 244 aaPredicted RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 TRIM49BA6NDI0 452 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 HOXC11O43248 304 aaPredicted RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 GREM1O60565 184 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 EPN2O95208 641 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 KIR2DL1P43626 348 aaPredicted RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 PLA2G4AP47712 749 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 PSEN1P49768 467 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 RAD23BP54727 409 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 KDSRQ06136 332 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 CRY1Q16526 586 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 PLK5Q496M5 336 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 HSF5Q4G112 596 aaPredicted RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 PREPLQ4J6C6 727 aaPredicted RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 ISM2Q6H9L7 571 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 KLHDC10Q6PID8 442 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 CCDC186Q7Z3E2 898 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 ETFBKMTQ8IXQ9 262 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 ELOA2Q8IYF1 753 aaPredicted RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 PHTF2Q8N3S3 785 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 ZNF276Q8N554 614 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 ALLCQ8N6M5 410 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 IL17RCQ8NAC3 791 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 TXNDC5Q8NBS9 432 aaKnown RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 NETO1Q8TDF5 533 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 ARID3AQ99856 593 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 UBXN6Q9BZV1 441 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 DUSP15Q9H1R2 295 aaPredicted RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 DEC1Q9P2X7 70 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 ARMCX3Q9UH62 379 aaPredicted RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 DNMT3LQ9UJW3 386 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 NAGPAQ9UK23 515 aa16.73■□□□□ 0.27
CRLF3-203ENST00000578692 LSM7Q9UK45 103 aaKnown RBP16.73■□□□□ 0.27
CRLF3-203ENST00000578692 DCDC2BA2VCK2 349 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 TBC1D3BA6NDS4 549 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 DCLK1O15075 740 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 TULP3O75386 442 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 RHOBTB1O94844 696 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 KLF8O95600 359 aaPredicted RBP16.72■□□□□ 0.27
CRLF3-203ENST00000578692 ZNF806P0C7X5 589 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 STIM1Q13586 685 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 USP39Q53GS9 565 aaKnown RBP16.72■□□□□ 0.27
CRLF3-203ENST00000578692 C10orf120Q5SQS8 335 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 TMEM92Q6UXU6 159 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 NUDT18Q6ZVK8 323 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 SCD5Q86SK9 330 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 RASSF3Q86WH2 238 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 DHTKD1Q96HY7 919 aaPredicted RBP16.72■□□□□ 0.27
CRLF3-203ENST00000578692 TPSD1Q9BZJ3 242 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 INVSQ9Y283 1065 aa16.72■□□□□ 0.27
CRLF3-203ENST00000578692 SGK1O00141 431 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 PSMA7O14818 248 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 MDM4O15151 490 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 GDF9O60383 454 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 RALAP11233 206 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 ELF2Q15723 593 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 CCDC6Q16204 474 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 EOGTQ5NDL2 527 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 ARHGAP17Q68EM7 881 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 ANO7Q6IWH7 933 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 TADA2BQ86TJ2 420 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 ANKRD52Q8NB46 1076 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 SLC35C1Q96A29 364 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 CNOT6LQ96LI5 555 aaKnown RBP16.71■□□□□ 0.27
CRLF3-203ENST00000578692 METTL14Q9HCE5 456 aaKnown RBP16.71■□□□□ 0.27
CRLF3-203ENST00000578692 POLMQ9NP87 494 aaPredicted RBP16.71■□□□□ 0.27
CRLF3-203ENST00000578692 CLIC5Q9NZA1 410 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 PCDHGA5Q9Y5G8 931 aa16.71■□□□□ 0.27
CRLF3-203ENST00000578692 DNAH14Q0VDD8 3507 aa16.71■□□□□ 0.26
CRLF3-203ENST00000578692 SLC30A4O14863 429 aa16.7■□□□□ 0.26
CRLF3-203ENST00000578692 ALDH1A2O94788 518 aa16.7■□□□□ 0.26
CRLF3-203ENST00000578692 CHRM1P11229 460 aaPredicted RBP16.7■□□□□ 0.26
CRLF3-203ENST00000578692 HNRNPLP14866 589 aaKnown RBP eCLIP16.7■□□□□ 0.26
CRLF3-203ENST00000578692 GBP1P32455 592 aa16.7■□□□□ 0.26
CRLF3-203ENST00000578692 PPP1R2P41236 205 aa16.7■□□□□ 0.26
CRLF3-203ENST00000578692 SLC8A3P57103 927 aa16.7■□□□□ 0.26
CRLF3-203ENST00000578692 CUL2Q13617 745 aa16.7■□□□□ 0.26
CRLF3-203ENST00000578692 SF3A2Q15428 464 aaKnown RBP16.7■□□□□ 0.26
CRLF3-203ENST00000578692 TPGS1Q6ZTW0 290 aa16.7■□□□□ 0.26
CRLF3-203ENST00000578692 PIGZQ86VD9 579 aa16.7■□□□□ 0.26
CRLF3-203ENST00000578692 TTC30AQ86WT1 665 aa16.7■□□□□ 0.26
CRLF3-203ENST00000578692 C12orf50Q8NA57 414 aaPredicted RBP16.7■□□□□ 0.26
CRLF3-203ENST00000578692 MDGA1Q8NFP4 955 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms