RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 BEST1O76090 585 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 SERPINF2P08697 491 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 CCDC130P13994 396 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 ZNF33AQ06730 810 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 BIRC3Q13489 604 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 ZNF667Q5HYK9 610 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 GRAMD4Q6IC98 578 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 SLC36A4Q6YBV0 504 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 HTR3DQ70Z44 454 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 ACOT1Q86TX2 421 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 SLC41A1Q8IVJ1 513 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 CEP76Q8TAP6 659 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 GTPBP2Q9BX10 602 aaKnown RBP22.21■■□□□ 1.15
TSEN54-205ENST00000578415 BLZF1Q9H2G9 400 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 SLC39A2Q9NP94 309 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 FOXD4L1Q9NU39 408 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 DNAJC17Q9NVM6 304 aaKnown RBP22.21■■□□□ 1.15
TSEN54-205ENST00000578415 CGNQ9P2M7 1197 aaKnown RBP22.21■■□□□ 1.15
TSEN54-205ENST00000578415 TFIP11Q9UBB9 837 aaKnown RBP22.21■■□□□ 1.15
TSEN54-205ENST00000578415 MYO18AQ92614 2054 aaKnown RBP22.21■■□□□ 1.15
TSEN54-205ENST00000578415 PKD1L2Q7Z442 2459 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 WDFY3Q8IZQ1 3526 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 LRRIQ3A6PVS8 624 aaPredicted RBP22.2■■□□□ 1.14
TSEN54-205ENST00000578415 EXOC3O60645 756 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 VNN1O95497 513 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 TBX18O95935 607 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 C4BPAP04003 597 aaKnown RBP22.2■■□□□ 1.14
TSEN54-205ENST00000578415 NDUFV2P19404 249 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 ATXN3P54252 364 aaPredicted RBP22.2■■□□□ 1.14
TSEN54-205ENST00000578415 CLDN10P78369 228 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 GFPT1Q06210 699 aaPredicted RBP22.2■■□□□ 1.14
TSEN54-205ENST00000578415 NCOA4Q13772 614 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 KNOP1Q1ED39 458 aaKnown RBP22.2■■□□□ 1.14
TSEN54-205ENST00000578415 NUDT18Q6ZVK8 323 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 OR2I1PQ8NGU4 316 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 PARD3BQ8TEW8 1205 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 ZCCHC14Q8WYQ9 949 aaKnown RBP22.2■■□□□ 1.14
TSEN54-205ENST00000578415 KLF16Q9BXK1 252 aaPredicted RBP22.2■■□□□ 1.14
TSEN54-205ENST00000578415 NACA2Q9H009 215 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 HMGXB4Q9UGU5 601 aa22.2■■□□□ 1.14
TSEN54-205ENST00000578415 PCNX2A6NKB5 2137 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 PI4KAP42356 2102 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 ATRXP46100 2492 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 PRRT4C9JH25 899 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 NEDD8-MDP1E9PL57 170 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 CACNG3O60359 315 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 CUTAO60888 179 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 FAM193AP78312 1265 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 ORC1Q13415 861 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 HDDC3Q8N4P3 179 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 SLC2A14Q8TDB8 520 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 ERLEC1Q96DZ1 483 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 MAGEF1Q9HAY2 307 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 CSNK1G1Q9HCP0 422 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 MSRB2Q9Y3D2 182 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 PCDH15Q96QU1 1955 aa22.19■■□□□ 1.14
TSEN54-205ENST00000578415 CLSTN1O94985 981 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 HOXB3P14651 431 aaPredicted RBP22.18■■□□□ 1.14
TSEN54-205ENST00000578415 AP3M2P53677 418 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 TOGARAM2Q6ZUX3 1019 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 CHPFQ8IZ52 775 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 MINDY1Q8N5J2 469 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 IPO4Q8TEX9 1081 aaKnown RBP22.18■■□□□ 1.14
TSEN54-205ENST00000578415 GABRG3Q99928 467 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 BBS2Q9BXC9 721 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 CD93Q9NPY3 652 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 CYLDQ9NQC7 956 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 OSER1Q9NX31 292 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 MARK1Q9P0L2 795 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 CYP8B1Q9UNU6 501 aa22.18■■□□□ 1.14
TSEN54-205ENST00000578415 ARHGAP33O14559 1287 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 POLR2DO15514 142 aaKnown RBP22.17■■□□□ 1.14
TSEN54-205ENST00000578415 OPHN1O60890 802 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 ZNF217O75362 1048 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 YEATS4O95619 227 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 CD59P13987 128 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 TYRP14679 529 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 NDST1P52848 882 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 MAP3K7CLP57077 242 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 TPGS1Q6ZTW0 290 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 GPRIN1Q7Z2K8 1008 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 RABEPKQ7Z6M1 372 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 CRYBG2Q8N1P7 616 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 C12orf29Q8N999 325 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 TRIML1Q8N9V2 468 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 HSPA12BQ96MM6 686 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 SLC6A17Q9H1V8 727 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 FBXO44Q9H4M3 255 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 TLR8Q9NR97 1041 aaKnown RBP22.17■■□□□ 1.14
TSEN54-205ENST00000578415 FAM49BQ9NUQ9 324 aa22.17■■□□□ 1.14
TSEN54-205ENST00000578415 PVALEFA0A1B0GWK0 134 aa22.16■■□□□ 1.14
TSEN54-205ENST00000578415 A0A1W2PQD8 194 aa22.16■■□□□ 1.14
TSEN54-205ENST00000578415 DLG4P78352 724 aa22.16■■□□□ 1.14
TSEN54-205ENST00000578415 CUL4BQ13620 913 aa22.16■■□□□ 1.14
TSEN54-205ENST00000578415 P2RY11Q96G91 374 aa22.16■■□□□ 1.14
TSEN54-205ENST00000578415 ZNF396Q96N95 335 aaPredicted RBP22.16■■□□□ 1.14
TSEN54-205ENST00000578415 XPO6Q96QU8 1125 aaKnown RBP22.16■■□□□ 1.14
TSEN54-205ENST00000578415 DNAAF2Q9NVR5 837 aaKnown RBP22.16■■□□□ 1.14
TSEN54-205ENST00000578415 DMAC2Q9NW81 257 aa22.16■■□□□ 1.14
TSEN54-205ENST00000578415 CACNA2D2Q9NY47 1150 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms