RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 RCOR3Q9P2K3 495 aaPredicted RBP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 USP18Q9UMW8 372 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 PACSIN2Q9UNF0 486 aaPredicted RBP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 GREB1Q4ZG55 1949 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 TMEM110-MUSTN1A8MSY1 372 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 FSCN2O14926 492 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 PRPSAP2O60256 369 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 CEP104O60308 925 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 LPXNO60711 386 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 VNN2O95498 520 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 MIPP30301 263 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 OR1D2P34982 312 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 SCAPQ12770 1279 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 SMC1AQ14683 1233 aaKnown RBP13□□□□□ -0.33
TSEN54-204ENST00000577197 PTPROQ16827 1216 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 SNX30Q5VWJ9 437 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 TRNP1Q6NT89 227 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 MSANTD2Q6P1R3 559 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 PRSS55Q6UWB4 352 aaPredicted RBP13□□□□□ -0.33
TSEN54-204ENST00000577197 RSPO2Q6UXX9 243 aaPredicted RBP13□□□□□ -0.33
TSEN54-204ENST00000577197 RNF19BQ6ZMZ0 732 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 GPRIN1Q7Z2K8 1008 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 MAP7D3Q8IWC1 876 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 EMC1Q8N766 993 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 PDZD8Q8NEN9 1154 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 SPATA4Q8NEY3 305 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 FAM149B1Q96BN6 582 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 TRMT2BQ96GJ1 504 aaKnown RBP13□□□□□ -0.33
TSEN54-204ENST00000577197 MYRFLQ96LU7 910 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 TCF25Q9BQ70 676 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 CARD6Q9BX69 1037 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 ENTPD7Q9NQZ7 604 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 OLA1Q9NTK5 396 aaKnown RBP13□□□□□ -0.33
TSEN54-204ENST00000577197 ASB3Q9Y575 518 aa13□□□□□ -0.33
TSEN54-204ENST00000577197 YJEFN3A6XGL0 299 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 E7ENQ6 273 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 SOX1O00570 391 aaPredicted RBP12.99□□□□□ -0.33
TSEN54-204ENST00000577197 SRGAP2O75044 1071 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 GJB6O95452 261 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 TRUB2O95900 331 aaKnown RBP12.99□□□□□ -0.33
TSEN54-204ENST00000577197 IGLV3-25P01717 112 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 OR4Q2P0C623 313 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 CSH1P0DML2 217 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 CSH2P0DML3 217 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 DNAJB1P25685 340 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 HTR7P34969 479 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 RDXP35241 583 aaKnown RBP12.99□□□□□ -0.33
TSEN54-204ENST00000577197 TAS2R40P59535 323 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 ERVFC1P60507 584 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 EIF4EBP2Q13542 120 aaPredicted RBP12.99□□□□□ -0.33
TSEN54-204ENST00000577197 CAMK1Q14012 370 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 CYP1B1Q16678 543 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 HABP4Q5JVS0 413 aaKnown RBP12.99□□□□□ -0.33
TSEN54-204ENST00000577197 CCDC70Q6NSX1 233 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 PHLDB2Q86SQ0 1253 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 TADA2BQ86TJ2 420 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 DEFB106AQ8N104 65 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 ARFGAP1Q8N6T3 406 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 MRPL43Q8N983 215 aaKnown RBP12.99□□□□□ -0.33
TSEN54-204ENST00000577197 C12orf50Q8NA57 414 aaPredicted RBP12.99□□□□□ -0.33
TSEN54-204ENST00000577197 ATAD1Q8NBU5 361 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 MICAL1Q8TDZ2 1067 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 FAM172AQ8WUF8 416 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 HDAC7Q8WUI4 952 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 B3GALT6Q96L58 329 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 SMOC2Q9H3U7 446 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 SLITRK6Q9H5Y7 841 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 LMCD1Q9NZU5 365 aa12.99□□□□□ -0.33
TSEN54-204ENST00000577197 PLXNA4Q9HCM2 1894 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 TRIOBPQ9H2D6 2365 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 TARSL2A2RTX5 802 aaKnown RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 PDE2AO00408 941 aaPredicted RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 CAPN9O14815 690 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 ZNF185O15231 689 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 ZNF189O75820 626 aaPredicted RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 CXCL14O95715 111 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 FGGP02679 453 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 FYNP06241 537 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 ADH1AP07327 375 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 POU2F2P09086 479 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 USP17L7P0C7H9 530 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 ZDHHC11BP0C7U3 371 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 PYGMP11217 842 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 YWHAQP27348 245 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 CXCR5P32302 372 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 GBP1P32455 592 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 MARCKSL1P49006 195 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 TUBP50607 506 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 HDAC4P56524 1084 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 YWHAGP61981 247 aaKnown RBP eCLIP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 DPYSL2Q16555 572 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 DCAF6Q58WW2 860 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 TFDP3Q5H9I0 405 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 BRMS1LQ5PSV4 323 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 BSPRYQ5W0U4 402 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 DRICH1Q6PGQ1 229 aaPredicted RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 KLHDC10Q6PID8 442 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 CCDC149Q6ZUS6 474 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms