RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 CXCL16Q9H2A7 254 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 PTPRHQ9HD43 1115 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 SMYD2Q9NRG4 433 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 FER1L6Q2WGJ9 1857 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 TCRBV7S2A1N4TA0A589 114 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 MDM4O15151 490 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 SPTLC1O15269 473 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 F9P00740 461 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 CSF2RAP15509 400 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 STX2P32856 288 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 ZBTB16Q05516 673 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 PSMD5Q16401 504 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 HIF1AQ16665 826 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 NPNTQ6UXI9 565 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 FIBCD1Q8N539 461 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 HHIPL1Q96JK4 782 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 TBCBQ99426 244 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 TTPALQ9BTX7 342 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 APOL5Q9BWW9 433 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 DNAJB4Q9UDY4 337 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 SSX2IPQ9Y2D8 614 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 NEU2Q9Y3R4 380 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 ADGRA2Q96PE1 1338 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 WDR91A4D1P6 747 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 NRP1O14786 923 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 ADAMTS4O75173 837 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 CTNNB1P35222 781 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 ATXN1P54253 815 aaKnown RBP8.7□□□□□ -1.02
NCBP3-205ENST00000575815 GNGT1P63211 74 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 TRADDQ15628 312 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 VARS2Q5ST30 1063 aaKnown RBP8.7□□□□□ -1.02
NCBP3-205ENST00000575815 ZNF697Q5TEC3 545 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 FUT10Q6P4F1 479 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 MON1BQ7L1V2 547 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 ATPAF2Q8N5M1 289 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 SCAMP5Q8TAC9 235 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 CCDC110Q8TBZ0 833 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 ATXN7L3BQ96GX2 97 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 IGFLR1Q9H665 355 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 ANKZF1Q9H8Y5 726 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 HAUS2Q9NVX0 235 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 TMEM161AQ9NX61 479 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 TARSL2A2RTX5 802 aaKnown RBP8.7□□□□□ -1.02
NCBP3-205ENST00000575815 TSPAN3O60637 253 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 PMPCBO75439 489 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 JCHAINP01591 159 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 UNGP13051 313 aaPredicted RBP8.7□□□□□ -1.02
NCBP3-205ENST00000575815 ZNF143P52747 638 aaPredicted RBP8.7□□□□□ -1.02
NCBP3-205ENST00000575815 USP41Q3LFD5 358 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 TTC30AQ86WT1 665 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 SH2D3CQ8N5H7 860 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 DEPDC1BQ8WUY9 529 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 RSPH1Q8WYR4 309 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 MRPS31Q92665 395 aaKnown RBP8.7□□□□□ -1.02
NCBP3-205ENST00000575815 CDKL2Q92772 493 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 SNRNP25Q9BV90 132 aaKnown RBP8.7□□□□□ -1.02
NCBP3-205ENST00000575815 KATNBL1Q9H079 304 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 MED4Q9NPJ6 270 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 MRPL17Q9NRX2 175 aaKnown RBP8.7□□□□□ -1.02
NCBP3-205ENST00000575815 DONSONQ9NYP3 566 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 VANGL2Q9ULK5 521 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 CHMP2BQ9UQN3 213 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 SH3BP1Q9Y3L3 701 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 NR2E1Q9Y466 385 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 SLC4A7Q9Y6M7 1214 aa8.7□□□□□ -1.02
NCBP3-205ENST00000575815 NDC80O14777 642 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 PAPSS1O43252 624 aaPredicted RBP8.69□□□□□ -1.02
NCBP3-205ENST00000575815 MSI1O43347 362 aaKnown RBP8.69□□□□□ -1.02
NCBP3-205ENST00000575815 LCA5LO95447 670 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 FGBP02675 491 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 CLTBP09497 229 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 ETS1P14921 441 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 XPAP23025 273 aaPredicted RBP8.69□□□□□ -1.02
NCBP3-205ENST00000575815 CCR1P32246 355 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 NOS2P35228 1153 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 GPD2P43304 727 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 EPHB3P54753 998 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 AMPD2Q01433 879 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 ZNF235Q14590 738 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 XYLT1Q86Y38 959 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 SRRM1Q8IYB3 904 aaKnown RBP8.69□□□□□ -1.02
NCBP3-205ENST00000575815 LRRC43Q8N309 656 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 MUC3BQ9H195 1237 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 ATXN3LQ9H3M9 355 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 FBXO44Q9H4M3 255 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 C11orf49Q9H6J7 331 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 KCND1Q9NSA2 647 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 XPO7Q9UIA9 1087 aaKnown RBP8.69□□□□□ -1.02
NCBP3-205ENST00000575815 PABPN1LA6NDY0 278 aaKnown RBP8.69□□□□□ -1.02
NCBP3-205ENST00000575815 DNM1LO00429 736 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 PMM2O15305 246 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 CAPN15O75808 1086 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 EOMESO95936 686 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 MX2P20592 715 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 KDELR1P24390 212 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 PDK1Q15118 436 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 PLEKHA7Q6IQ23 1121 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 RAPH1Q70E73 1250 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 OSTM1Q86WC4 334 aa8.69□□□□□ -1.02
NCBP3-205ENST00000575815 NPAS4Q8IUM7 802 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms