RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CTDNEP1O95476 244 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 LDOC1O95751 146 aaPredicted RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 ITGB3P05106 788 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 IRF1P10914 325 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 FDPSP14324 419 aaKnown RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 TYRP14679 529 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 ABCB4P21439 1286 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 BDNFP23560 247 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 ADSSP30520 456 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 TRAPPC10P48553 1259 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 DGKGP49619 791 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 ACADVLP49748 655 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 TPMTP51580 245 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 CLDN6P56747 220 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 C21orf59P57076 290 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 USP46P62068 366 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 PSMC1P62191 440 aaKnown RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 TFAMQ00059 246 aaKnown RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 IL9RQ01113 521 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 GOLGA8FQ08AF8 430 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 GOLGA8DPQ0D2H9 430 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 IFRD2Q12894 506 aaPredicted RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 TAF10Q12962 218 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 ZRSR1Q15695 479 aaKnown RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 CCDC142Q17RM4 750 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 SLFN12LQ6IEE8 588 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 FAM171BQ6P995 826 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 USP49Q70CQ1 688 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 BBS7Q8IWZ6 715 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 UCMAQ8WVF2 138 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 OVCA2Q8WZ82 227 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 FBXO32Q969P5 355 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 CDK5RAP3Q96JB5 506 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 ZNF578Q96N58 590 aaPredicted RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 BBS2Q9BXC9 721 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 ACE2Q9BYF1 805 aaPredicted RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 SEMA4CQ9C0C4 833 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 MKRN2Q9H000 416 aaKnown RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 TM9SF3Q9HD45 589 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 WDR35Q9P2L0 1181 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 LSM7Q9UK45 103 aaKnown RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 AGO2Q9UKV8 859 aaKnown RBP6.26□□□□□ -1.41
SMG6-219ENST00000575663 ITGA11Q9UKX5 1188 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 HCN2Q9UL51 889 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 CDH9Q9ULB4 789 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 AGAP1Q9UPQ3 857 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 SNX9Q9Y5X1 595 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 STON1Q9Y6Q2 735 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 PTPRDP23468 1912 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 OBSL1O75147 1896 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 TRIP11Q15643 1979 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 PTPRJQ12913 1337 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 A0A1B0GTQ1 180 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 KCNJ18B7U540 433 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 PRRT4C9JH25 899 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 F8VP50 259 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 H0Y8X5 98 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 GABRDO14764 452 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 TRIM24O15164 1050 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 COCHO43405 550 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 DTNBO60941 627 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 TBCAO75347 108 aaKnown RBP6.25□□□□□ -1.41
SMG6-219ENST00000575663 FAM13AO94988 1023 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 RTN3O95197 1032 aaPredicted RBP6.25□□□□□ -1.41
SMG6-219ENST00000575663 IGLV3-19P01714 112 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 ITGAVP06756 1048 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 KRT19P08727 400 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 GLDCP23378 1020 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 CTSKP43235 329 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 TUBP50607 506 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 BCAT1P54687 386 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 CDH8P55286 799 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 VAC14Q08AM6 782 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 DNAJC3Q13217 504 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 ILKQ13418 452 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 C6orf132Q5T0Z8 1188 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 HECTD3Q5T447 861 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 FBXL19Q6PCT2 694 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 DPH6Q7L8W6 267 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 KCNK18Q7Z418 384 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 OSTM1Q86WC4 334 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 CACUL1Q86Y37 369 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 TMEM25Q86YD3 366 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 TMPRSS6Q8IU80 811 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 CCDC83Q8IWF9 413 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 DHX40Q8IX18 779 aaKnown RBP6.25□□□□□ -1.41
SMG6-219ENST00000575663 LSMEM2Q8N112 164 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 CACTIN-AS1Q8N1I8 211 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 MYCT1Q8N699 235 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 SYT2Q8N9I0 419 aaPredicted RBP6.25□□□□□ -1.41
SMG6-219ENST00000575663 C1orf216Q8TAB5 229 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 CACTINQ8WUQ7 758 aaKnown RBP6.25□□□□□ -1.41
SMG6-219ENST00000575663 KCNE4Q8WWG9 221 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 TTC9Q92623 222 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 GTF3C6Q969F1 213 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 NAF1Q96HR8 494 aaKnown RBP6.25□□□□□ -1.41
SMG6-219ENST00000575663 C8orf48Q96LL4 319 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 TRIM4Q9C037 500 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 ELOVL4Q9GZR5 314 aa6.25□□□□□ -1.41
SMG6-219ENST00000575663 FOXP1Q9H334 677 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms