RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 PCOLCE2Q9UKZ9 415 aa10.58□□□□□ -0.72
CALCOCO2-227ENST00000575560 APOBEC2Q9Y235 224 aaKnown RBP10.58□□□□□ -0.72
CALCOCO2-227ENST00000575560 SH3BP1Q9Y3L3 701 aa10.58□□□□□ -0.72
CALCOCO2-227ENST00000575560 NFE2L3Q9Y4A8 694 aa10.58□□□□□ -0.72
CALCOCO2-227ENST00000575560 SRPRBQ9Y5M8 271 aaKnown RBP10.58□□□□□ -0.72
CALCOCO2-227ENST00000575560 CLIC4Q9Y696 253 aa10.58□□□□□ -0.72
CALCOCO2-227ENST00000575560 PLXNB3Q9ULL4 1909 aa10.58□□□□□ -0.72
CALCOCO2-227ENST00000575560 GFRA2O00451 464 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 CACNG3O60359 315 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 NDUFS2O75306 463 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 STAU1O95793 577 aaKnown RBP10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 CISD3P0C7P0 127 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 IDEP14735 1019 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 GNSP15586 552 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 MAOBP27338 520 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 PGFP49763 221 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 GRIK2Q13002 908 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 WDR45BQ5MNZ6 344 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 GRAMD4Q6IC98 578 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 DBX2Q6ZNG2 339 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 METTL3Q86U44 580 aaKnown RBP10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 RGL4Q8IZJ4 473 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 GLIS3Q8NEA6 775 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 MDM1Q8TC05 714 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 ZNF516Q92618 1163 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 FOXJ1Q92949 421 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 BBC3Q96PG8 261 aaPredicted RBP10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 SLC6A17Q9H1V8 727 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 SCUBE2Q9NQ36 999 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 DNAJC17Q9NVM6 304 aaKnown RBP10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 COMMD8Q9NX08 183 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 HSPBP1Q9NZL4 362 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 MARK1Q9P0L2 795 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 DKK4Q9UBT3 224 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 HELZ2Q9BYK8 2649 aaKnown RBP10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 APC2O95996 2303 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 ACACAQ13085 2346 aa10.57□□□□□ -0.72
CALCOCO2-227ENST00000575560 A0A087X0B3 334 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 A8MXQ7 604 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 WASH3PC4AMC7 463 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 DKK1O94907 266 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 ZNF883P0CG24 379 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 TYRP14679 529 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 SLC5A3P53794 718 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 RABEP1Q15276 862 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 TMPRSS7Q7RTY8 843 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 CADM4Q8NFZ8 388 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 BAHD1Q8TBE0 780 aaPredicted RBP10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 HNRNPLLQ8WVV9 542 aaKnown RBP10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 ERLEC1Q96DZ1 483 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 CLIC6Q96NY7 704 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 XPO6Q96QU8 1125 aaKnown RBP10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 KLF16Q9BXK1 252 aaPredicted RBP10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 GZF1Q9H116 711 aaPredicted RBP10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 XYLT2Q9H1B5 865 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 ITM2CQ9NQX7 267 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 ASH1LQ9NR48 2969 aaKnown RBP10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 TOR4AQ9NXH8 423 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 PPP4R2Q9NY27 417 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 CACNA2D2Q9NY47 1150 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 WSB2Q9NYS7 404 aaPredicted RBP10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 GMIPQ9P107 970 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 WDR35Q9P2L0 1181 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 FBXO10Q9UK96 956 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 SMC3Q9UQE7 1217 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 RAXQ9Y2V3 346 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 RAD54BQ9Y620 910 aa10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 FLNBO75369 2602 aaKnown RBP10.56□□□□□ -0.72
CALCOCO2-227ENST00000575560 A0A1B0GTW7 788 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 NEDD8-MDP1E9PL57 170 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 TGFB1I1O43294 461 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 TBX18O95935 607 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 DLATP10515 647 aaKnown RBP10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 IRF1P10914 325 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 TNNI1P19237 187 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 CD6P30203 668 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 ATICP31939 592 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 MYL6P60660 151 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 TNNC1P63316 161 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 BNC1Q01954 994 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 PSMD6Q15008 389 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 SNRNP35Q16560 246 aaKnown RBP10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 CCDC73Q6ZRK6 1079 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 EPM2AIP1Q7L775 607 aaPredicted RBP10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 FAM35AQ86V20 835 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 CCDC65Q8IXS2 484 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 RDH13Q8NBN7 331 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 C1orf216Q8TAB5 229 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 ZNF507Q8TCN5 953 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 SCFD1Q8WVM8 642 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 HPS3Q969F9 1004 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 P2RY11Q96G91 374 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 TOE1Q96GM8 510 aaKnown RBP10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 CGRRF1Q99675 332 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 BBS2Q9BXC9 721 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 PANK2Q9BZ23 570 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 TRIM9Q9C026 710 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 IL21RQ9HBE5 538 aa10.55□□□□□ -0.72
CALCOCO2-227ENST00000575560 CSNK1G1Q9HCP0 422 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms