RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	PEX26	Q7Z412	305 aa		12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	SCD5	Q86SK9	330 aa		12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	NT5DC3	Q86UY8	548 aa		12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	NDRG1	Q92597	394 aa	Known RBP	12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	CENPI	Q92674	756 aa	Predicted RBP	12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	PGAP3	Q96FM1	320 aa	Predicted RBP	12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	BTBD6	Q96KE9	485 aa		12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	WDR24	Q96S15	920 aa		12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	NPY6R	Q99463	290 aa		12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	TRIM7	Q9C029	511 aa		12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	NSUN3	Q9H649	340 aa	Known RBP	12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	MAN1C1	Q9NR34	630 aa		12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	OLA1	Q9NTK5	396 aa	Known RBP	12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	ZDHHC7	Q9NXF8	308 aa		12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116	COL4A4	P53420	1690 aa	Predicted RBP	12.45	□□□□□ -0.42
PRPF8-212	ENST00000575116		A0A1W2PQH9	124 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	CTAGE9	A4FU28	777 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	RFXAP	O00287	272 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	PER2	O15055	1255 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	XYLB	O75191	536 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	CSPG5	O95196	566 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	F9	P00740	461 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	RALA	P11233	206 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	NCAM1	P13591	858 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	EPCAM	P16422	314 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	POU3F3	P20264	500 aa	Predicted RBP	12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	COMT	P21964	271 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	GBP1	P32455	592 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	PCK1	P35558	622 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	NRIP1	P48552	1158 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	KCNC3	Q14003	757 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	LRRC38	Q5VT99	294 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	SYPL2	Q5VXT5	272 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	TRNP1	Q6NT89	227 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	SYT10	Q6XYQ8	523 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	TMEM184A	Q6ZMB5	413 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	STRADA	Q7RTN6	431 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	BNIPL	Q7Z465	357 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	ADGRD2	Q7Z7M1	963 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	RBM23	Q86U06	439 aa	Known RBP	12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	NAPG	Q99747	312 aa	Predicted RBP	12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	TRPM5	Q9NZQ8	1165 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	GMIP	Q9P107	970 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	DNAI1	Q9UI46	699 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	MAGED2	Q9UNF1	606 aa	Predicted RBP	12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	NAALADL1	Q9UQQ1	740 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	HCFC2	Q9Y5Z7	792 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	CEP290	O15078	2479 aa		12.44	□□□□□ -0.42
PRPF8-212	ENST00000575116	ZNF638	Q14966	1978 aa	Known RBP	12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	CCDC66	A2RUB6	948 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	TMEM110-MUSTN1	A8MSY1	372 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	SPOP	O43791	374 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	FTCD	O95954	541 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	F11	P03951	625 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	PRLR	P16471	622 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	PTPN2	P17706	415 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	CTNNA2	P26232	953 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	TUB	P50607	506 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	RPS6KA1	Q15418	735 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	HADH	Q16836	314 aa	Known RBP	12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	MSANTD2	Q6P1R3	559 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	TADA2B	Q86TJ2	420 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	LEMD2	Q8NC56	503 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	STKLD1	Q8NE28	680 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	KIF18A	Q8NI77	898 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	RNF139	Q8WU17	664 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	CASP10	Q92851	521 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	CD101	Q93033	1021 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	HES6	Q96HZ4	224 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	CFAP57	Q96MR6	1250 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	LRRC3	Q9BY71	257 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	PRKD2	Q9BZL6	878 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	NMUR1	Q9HB89	426 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	DZANK1	Q9NVP4	752 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	ATG2A	Q2TAZ0	1938 aa		12.43	□□□□□ -0.42
PRPF8-212	ENST00000575116	MYO16	Q9Y6X6	1858 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	ZNF840P	A6NDX5	716 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	SOBP	A7XYQ1	873 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	PSTPIP1	O43586	416 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	LRCH4	O75427	683 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	SRGAP2B	P0DMP2	458 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	RARG	P13631	454 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	PFKL	P17858	780 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	CDC25C	P30307	473 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	CTNNA1	P35221	906 aa	Known RBP	12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	SULT1E1	P49888	294 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	EPHA5	P54756	1037 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	ATP11A	P98196	1134 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	TUBB2A	Q13885	445 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	PAPD7	Q5XG87	772 aa	Known RBP	12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	KLHDC10	Q6PID8	442 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	POLN	Q7Z5Q5	900 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	RHOT1	Q8IXI2	618 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	ARFGAP1	Q8N6T3	406 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	UBL4B	Q8N7F7	174 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms