RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CNOT6LQ96LI5 555 aaKnown RBP22.3■■□□□ 1.16
CHRNB1-206ENST00000574054 SPHK2Q9NRA0 654 aa22.3■■□□□ 1.16
CHRNB1-206ENST00000574054 VPS45Q9NRW7 570 aa22.3■■□□□ 1.16
CHRNB1-206ENST00000574054 RXFP3Q9NSD7 469 aa22.3■■□□□ 1.16
CHRNB1-206ENST00000574054 A0A1W2PQH9 124 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 HHLA1C9JL84 531 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 SGK1O00141 431 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 TULP3O75386 442 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 HNRNPLP14866 589 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 GTF2H1P32780 548 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 ATP5C1P36542 298 aaKnown RBP22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 MXI1P50539 228 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 PNOCQ13519 176 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 TCEAL6Q6IPX3 200 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 RASSF3Q86WH2 238 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 WHAMMQ8TF30 809 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 TCEAL3Q969E4 200 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 KLF16Q9BXK1 252 aaPredicted RBP22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 OSER1Q9NX31 292 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 BCCIPQ9P287 314 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 DEC1Q9P2X7 70 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 LSM7Q9UK45 103 aaKnown RBP22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 PCDHA5Q9Y5H7 936 aa22.29■■□□□ 1.16
CHRNB1-206ENST00000574054 ACACBO00763 2458 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 CETN3O15182 167 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 KIR2DL1P43626 348 aaPredicted RBP22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 HSF5Q4G112 596 aaPredicted RBP22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 PREPLQ4J6C6 727 aaPredicted RBP22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 EOGTQ5NDL2 527 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 C10orf120Q5SQS8 335 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 C11orf74Q86VG3 221 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 ETFBKMTQ8IXQ9 262 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 PHTF2Q8N3S3 785 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 SEMA4DQ92854 862 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 HEXIM2Q96MH2 286 aaKnown RBP22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 DUSP9Q99956 384 aaKnown RBP22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 NMUR1Q9HB89 426 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 POLMQ9NP87 494 aaPredicted RBP22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 CYLDQ9NQC7 956 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 RMND1Q9NWS8 449 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 NAGPAQ9UK23 515 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 NUDT5Q9UKK9 219 aa22.28■■□□□ 1.16
CHRNB1-206ENST00000574054 A0A0A0MRY4 1105 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 BCLAF3A2AJT9 711 aaKnown RBP22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 GOLGA6L4A6NEF3 574 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 MDM4O15151 490 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 STX10O60499 249 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 CAVIN2O95810 425 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 CHRM1P11229 460 aaPredicted RBP22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 RARGP13631 454 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 BCKDHBP21953 392 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 LIMK1P53667 647 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 C10orf76Q5T2E6 689 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 PPP1R26Q5T8A7 1209 aaPredicted RBP22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 STPG1Q5TH74 334 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 PMS2CLQ68D20 193 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 NUDT18Q6ZVK8 323 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 HTR3DQ70Z44 454 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 FBXL13Q8NEE6 735 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 HMGB4Q8WW32 186 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 DDX1Q92499 740 aaKnown RBP22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 DUSP16Q9BY84 665 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 PNPLA8Q9NP80 782 aa22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 DNAJC17Q9NVM6 304 aaKnown RBP22.27■■□□□ 1.16
CHRNB1-206ENST00000574054 ABCA7Q8IZY2 2146 aa22.27■■□□□ 1.15
CHRNB1-206ENST00000574054 EPG5Q9HCE0 2579 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 NEDD8-MDP1E9PL57 170 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 KIF11P52732 1056 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 DCAF17Q5H9S7 520 aaPredicted RBP22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 TCERG1LQ5VWI1 586 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 GRAMD4Q6IC98 578 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 TPGS1Q6ZTW0 290 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 CYP2U1Q7Z449 544 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 PGBD3Q8N328 593 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 ZNF513Q8N8E2 541 aaPredicted RBP22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 RLN3Q8WXF3 142 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 TSG101Q99816 390 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 BBS2Q9BXC9 721 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 CISHQ9NSE2 258 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 RAB20Q9NX57 234 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 DNMT3LQ9UJW3 386 aa22.26■■□□□ 1.15
CHRNB1-206ENST00000574054 CHD8Q9HCK8 2581 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 TCRBV21S2A2A0A5A6 115 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 TRIM24O15164 1050 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 GREM1O60565 184 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 ADAM23O75077 832 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 PRCPP42785 496 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 DHPSP49366 369 aaPredicted RBP22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 RNF43Q68DV7 783 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 TRMT11Q7Z4G4 463 aaKnown RBP22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 MIB1Q86YT6 1006 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 FMR1NBQ8N0W7 255 aaPredicted RBP22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 TTC39CQ8N584 583 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 TERB1Q8NA31 727 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 SPACA7Q96KW9 195 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 ARID3AQ99856 593 aa22.25■■□□□ 1.15
CHRNB1-206ENST00000574054 MAP3K13O43283 966 aa22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 ADRB1P08588 477 aa22.24■■□□□ 1.15
CHRNB1-206ENST00000574054 TYRP14679 529 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms