RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 EDEM1Q92611 657 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 SMARCD2Q92925 531 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 ZSWIM3Q96MP5 696 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 PANX2Q96RD6 677 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 CYP2S1Q96SQ9 504 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 CHP1Q99653 195 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 CCSER2Q9H7U1 834 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 WDR35Q9P2L0 1181 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 EPS15L1Q9UBC2 864 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 NUDT5Q9UKK9 219 aa15.21■□□□□ 0.03
NPLOC4-209ENST00000572760 HSF2BPO75031 334 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 OAS1P00973 400 aaKnown RBP15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 FTLP02792 175 aaPredicted RBP15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 GABRB2P47870 512 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 PGFP49763 221 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 RNASE9P60153 205 aaKnown RBP15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 YWHAZP63104 245 aaKnown RBP15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 CDK17Q00537 523 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 ZNF268Q14587 947 aaPredicted RBP15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 TJAP1Q5JTD0 557 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 FAM78AQ5JUQ0 283 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 CCDC122Q5T0U0 273 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 HFE2Q6ZVN8 426 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 PHLDB2Q86SQ0 1253 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 XYLT1Q86Y38 959 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 NHEJ1Q9H9Q4 299 aaPredicted RBP15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 ZFP14Q9HCL3 533 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 OLA1Q9NTK5 396 aaKnown RBP15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 OSER1Q9NX31 292 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 TAS2R14Q9NYV8 317 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 RASAL2Q9UJF2 1139 aa15.2■□□□□ 0.02
NPLOC4-209ENST00000572760 A0A087X0T9 212 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 COCHO43405 550 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 GRAP2O75791 330 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 GLI1P08151 1106 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 FAM228BP0C875 321 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 NCAM1P13591 858 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 GFPT1Q06210 699 aaPredicted RBP15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 EFEMP1Q12805 493 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 ALKBH5Q6P6C2 394 aaKnown RBP15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 OLFML1Q6UWY5 402 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 BHLHA9Q7RTU4 235 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 TMTC1Q8IUR5 882 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 MCOLN2Q8IZK6 566 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 ZDHHC14Q8IZN3 488 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 E2F7Q96AV8 911 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 TRIM11Q96F44 468 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 VCPIP1Q96JH7 1222 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 ASB16Q96NS5 453 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 SLC22A12Q96S37 553 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 SELENOOQ9BVL4 669 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 RNF38Q9H0F5 515 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 SMG9Q9H0W8 520 aaKnown RBP15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 POPDC2Q9HBU9 364 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 TDP1Q9NUW8 608 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 ASNSD1Q9NWL6 643 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 SMPD4Q9NXE4 827 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 LIMD1Q9UGP4 676 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 DNMT3LQ9UJW3 386 aa15.19■□□□□ 0.02
NPLOC4-209ENST00000572760 MYOFQ9NZM1 2061 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 LOC730098B7Z3J9 87 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 MDM4O15151 490 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 TBX18O95935 607 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 CYLC1P35663 651 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 SCNN1AP37088 669 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 SLC7A9P82251 487 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 ZP2Q05996 745 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 SLC18A3Q16572 532 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 DNAJC24Q6P3W2 148 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 MON1BQ7L1V2 547 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 SLC26A9Q7LBE3 791 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 MIB1Q86YT6 1006 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 YAF2Q8IY57 180 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 DEFB106AQ8N104 65 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 CELF5Q8N6W0 485 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 ST13P5Q8NFI4 369 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 OLIG1Q8TAK6 271 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 ZNF653Q96CK0 615 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 PIWIL1Q96J94 861 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 BAG1Q99933 345 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 KIF9Q9HAQ2 790 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 METTL5Q9NRN9 209 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 MARCH2Q9P0N8 246 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 IGSF9Q9P2J2 1179 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 CPQQ9Y646 472 aa15.18■□□□□ 0.02
NPLOC4-209ENST00000572760 ANKRD62A6NC57 917 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 HEPACAM2A8MVW5 462 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 NRDCO43847 1150 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 DAB1O75553 588 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 IPO7O95373 1038 aaKnown RBP15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 OLFM2O95897 454 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 KRT3P12035 628 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 ABCB4P21439 1286 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 WEE1P30291 646 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 VIPR2P41587 438 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 PTP4A2Q12974 167 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms