RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 TFE3P19532 575 aaPredicted RBP15.83■□□□□ 0.13
CIITA-204ENST00000570546 HOXA10P31260 410 aaPredicted RBP15.83■□□□□ 0.13
CIITA-204ENST00000570546 SLC34A1Q06495 639 aa15.83■□□□□ 0.13
CIITA-204ENST00000570546 ZSWIM2Q8NEG5 633 aa15.83■□□□□ 0.13
CIITA-204ENST00000570546 CCDC126Q96EE4 140 aa15.83■□□□□ 0.13
CIITA-204ENST00000570546 TBCBQ99426 244 aa15.83■□□□□ 0.13
CIITA-204ENST00000570546 C10orf88Q9H8K7 445 aa15.83■□□□□ 0.13
CIITA-204ENST00000570546 STARD13Q9Y3M8 1113 aa15.83■□□□□ 0.13
CIITA-204ENST00000570546 LCA5LO95447 670 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 F9P00740 461 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 WLSQ5T9L3 541 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 SEPT5Q99719 369 aaPredicted RBP15.83■□□□□ 0.12
CIITA-204ENST00000570546 CSDE1O75534 798 aaKnown RBP15.83■□□□□ 0.12
CIITA-204ENST00000570546 SUPT7LO94864 414 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 MIPP30301 263 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 PTPN7P35236 360 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 CHKAP35790 457 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 CDK16Q00536 496 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 RAD51Q06609 339 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 SNX17Q15036 470 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 FAM162AQ96A26 154 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 SAR1AQ9NR31 198 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 KNDC1Q76NI1 1749 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 IFNA8P32881 189 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 SERPINB10P48595 397 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 TBL3Q12788 808 aaKnown RBP15.83■□□□□ 0.12
CIITA-204ENST00000570546 MPP3Q13368 585 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 DPYSL3Q14195 570 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 MUC3BQ9H195 1237 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 VANGL2Q9ULK5 521 aa15.83■□□□□ 0.12
CIITA-204ENST00000570546 APOC4-APOC2K7ER74 178 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 TGFB1I1O43294 461 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 LIASO43766 372 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 APOC2P02655 101 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 SERPINE1P05121 402 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 NNMTP40261 264 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 FGFBP2Q9BYJ0 223 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 CHST12Q9NRB3 414 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 THAP1Q9NVV9 213 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 PKP3Q9Y446 797 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 V9GYQ6 96 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 C17orf102A2RUQ5 167 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 E7ENQ6 273 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 MPOP05164 745 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 CPT1AP50416 773 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 MAP3K7CLP57077 242 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 HGSNATQ68CP4 663 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 STK32AQ8WU08 396 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 SLCO1B7G3V0H7 640 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 FBXO21O94952 628 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 OAZ1P54368 228 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 CDH8P55286 799 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 CXCL9Q07325 125 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 SNX30Q5VWJ9 437 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 TTC33Q6PID6 262 aaPredicted RBP15.82■□□□□ 0.12
CIITA-204ENST00000570546 EP400NLQ6ZTU2 488 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 DEFB107AQ8IZN7 70 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 BLOC1S6Q9UL45 172 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 PCDHGB4Q9UN71 923 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 IQCA1LA6NCM1 817 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 MEI4A8MW99 385 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 HIST1H2AGP0C0S8 130 aaPredicted RBP15.82■□□□□ 0.12
CIITA-204ENST00000570546 PGAM1P18669 254 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 HIST1H2ADP20671 130 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 KDELR1P24390 212 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 CHSY1Q86X52 802 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 CERS5Q8N5B7 392 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 INPP5DQ92835 1189 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 DCUN1D1Q96GG9 259 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 VPS50Q96JG6 964 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 HIST1H2AHQ96KK5 128 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 HIST1H2AJQ99878 128 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 H2AFJQ9BTM1 129 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 ACTL7BQ9Y614 415 aa15.82■□□□□ 0.12
CIITA-204ENST00000570546 CYP2B6P20813 491 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 PSMA4P25789 261 aaKnown RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 FICDQ9BVA6 458 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 TMEM51Q9NW97 253 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 FAM208AQ9UK61 1670 aaKnown RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 CCL15-CCL14A0A0B4J2E2 113 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 CETPP11597 493 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 KCNA4P22459 653 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 DDR1Q08345 913 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 CCL15Q16663 113 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 ZRANB3Q5FWF4 1079 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 GRTP1Q5TC63 336 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 RASGEF1CQ8N431 466 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 TMEM161BQ8NDZ6 487 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 DDI1Q8WTU0 396 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 SHC3Q92529 594 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 HSD17B14Q9BPX1 270 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 ASCC2Q9H1I8 757 aaPredicted RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 TBC1D23Q9NUY8 699 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 ARMCX1Q9P291 453 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 AFDNP55196 1824 aaKnown RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 SOAT2O75908 522 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 TGFB3P10600 412 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 FLT3P36888 993 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 ACAP1Q15027 740 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 MAPRE1Q15691 268 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms