RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	HIC2	Q96JB3	615 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	CTAGE1	Q96RT6	745 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	TRMO	Q9BU70	441 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	CDH19	Q9H159	772 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	ATP6V0A4	Q9HBG4	840 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	ZNF180	Q9UJW8	692 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	SPATA31A1	Q5TZJ5	1347 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	FAM90A8P	A6NJQ4	464 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	CD8B2	A6NJW9	211 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	AQP7P3	A6NL99	342 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	AKAP10	O43572	662 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	TULP3	O75386	442 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	INMT	O95050	263 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	FAM90A13P	P0C7W8	464 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	FAM90A24P	P0C7X0	464 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	SLC7A1	P30825	629 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	IGBP1	P78318	339 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	ZNF91	Q05481	1191 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	ERV3-1	Q14264	604 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	KCNB1	Q14721	858 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	ST3GAL2	Q16842	350 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	PIM3	Q86V86	326 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	ANKRD13B	Q86YJ7	626 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	KIAA0319L	Q8IZA0	1049 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	PNPLA1	Q8N8W4	532 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	OR56A3	Q8NH54	315 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	MAFA	Q8NHW3	353 aa	Predicted RBP	4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	MAML1	Q92585	1016 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	EDC3	Q96F86	508 aa	Known RBP	4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	ZDHHC12	Q96GR4	267 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	KAZALD1	Q96I82	304 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	HS6ST2	Q96MM7	605 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	NT5C1B	Q96P26	610 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	FOXP1	Q9H334	677 aa	Predicted RBP	4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	HS3ST3B1	Q9Y662	390 aa		4.11	□□□□□ -1.75
UBR1-209	ENST00000569243	CAPN8	A6NHC0	703 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	TMEM233	B4DJY2	109 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	FAM227A	F5H4B4	570 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	PYCARD-AS1	I3L0S3	204 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	TBX3	O15119	743 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	RGS10	O43665	173 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	RRP9	O43818	475 aa	Known RBP	4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	SRGAP2	O75044	1071 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	USP12	O75317	370 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	RASAL1	O95294	804 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	ARHGEF7	Q14155	803 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	SEMA3A	Q14563	771 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	CLCA4	Q14CN2	919 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	FAM110C	Q1W6H9	321 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	ZNF750	Q32MQ0	723 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	CXorf57	Q6NSI4	855 aa	Known RBP	4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	MZT2A	Q6P582	158 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	PPP1R35	Q8TAP8	253 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	WDYHV1	Q96HA8	205 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	VPS50	Q96JG6	964 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	SEMA5B	Q9P283	1151 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	HEY2	Q9UBP5	337 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	CAPN11	Q9UMQ6	739 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	L1RE1	Q9UN81	338 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	ICK	Q9UPZ9	632 aa		4.1	□□□□□ -1.75
UBR1-209	ENST00000569243	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	CLIC1	O00299	241 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	EXOC5	O00471	708 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	ADAM10	O14672	748 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	CTNND1	O60716	968 aa	Known RBP	4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	TOMM40	O96008	361 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	CD63	P08962	238 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	TACR3	P29371	465 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	PTDSS1	P48651	473 aa	Known RBP	4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	PGD	P52209	483 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	SEC23B	Q15437	767 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	SLC9C1	Q4G0N8	1177 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	LVRN	Q6Q4G3	990 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	ZDHHC24	Q6UX98	284 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	OVCH2	Q7RTZ1	564 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	ZBTB34	Q8NCN2	500 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	RUNDC1	Q96C34	613 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	P2RY11	Q96G91	374 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	C22orf23	Q9BZE7	217 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	TMEM184C	Q9NVA4	438 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	DKK4	Q9UBT3	224 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	LPAR3	Q9UBY5	353 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	AFF4	Q9UHB7	1163 aa	Known RBP	4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	STEAP1	Q9UHE8	339 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	FZD4	Q9ULV1	537 aa		4.09	□□□□□ -1.75
UBR1-209	ENST00000569243	GTPBP1	O00178	669 aa	Known RBP	4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	PARP1	P09874	1014 aa	Known RBP	4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	ADRA1D	P25100	572 aa		4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	CPT1A	P50416	773 aa		4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	RAB27A	P51159	221 aa		4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	B4GALNT1	Q00973	533 aa		4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	SLC29A2	Q14542	456 aa		4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	CACHD1	Q5VU97	1274 aa		4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	TPH2	Q8IWU9	490 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms