RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 HSPH1Q92598 858 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 RUBCNQ92622 972 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 CLSTN3Q9BQT9 956 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 LRRC1Q9BTT6 524 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 HSFX1Q9UBD0 423 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 SCML2Q9UQR0 700 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 C3orf70A6NLC5 250 aaPredicted RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 M0QYT0 321 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 MDM4O15151 490 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 FGF18O76093 207 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 TJP3O95049 919 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 RTN3O95197 1032 aaPredicted RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 VNN2O95498 520 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 LINC00271P0C7V0 271 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 ATP2A2P16615 1042 aaKnown RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 TFE3P19532 575 aaPredicted RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 MCM3P25205 808 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 CHRNA3P32297 505 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 RDXP35241 583 aaKnown RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 CDKN2BP42772 138 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 CREMQ03060 361 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 DUSP4Q13115 394 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 KLF1Q13351 362 aaPredicted RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 SIX1Q15475 284 aaPredicted RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 RAB6CQ53S08 254 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 ERMARDQ5T6L9 678 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 BSPRYQ5W0U4 402 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 VPS52Q8N1B4 723 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 PRELID2Q8N945 189 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 ANKRD7Q92527 254 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 ACSF2Q96CM8 615 aaPredicted RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 PGAP3Q96FM1 320 aaPredicted RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 RUNDC3BQ96NL0 473 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 SEPT5Q99719 369 aaPredicted RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 PARD6BQ9BYG5 372 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 RAB6CQ9H0N0 254 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 DDX47Q9H0S4 455 aaKnown RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 EPC1Q9H2F5 836 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.16□□□□□ -0.37e-14■□□□□ 10.3
GGA2-213ENST00000568922 HOMER3Q9NSC5 361 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 ABCC13Q9NSE7 274 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.3
GGA2-213ENST00000568922 IL37Q9NZH6 218 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 AFF4Q9UHB7 1163 aaKnown RBP13.16□□□□□ -0.3
GGA2-213ENST00000568922 SSX2IPQ9Y2D8 614 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 SLC27A5Q9Y2P5 690 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 NR2E1Q9Y466 385 aa13.16□□□□□ -0.3
GGA2-213ENST00000568922 GREB1Q4ZG55 1949 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 hCG_1818297A0A087WSY0 165 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 TCRBV7S2A1N4TA0A589 114 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 ADAM12O43184 909 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 TLL1O43897 1013 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 RPL17P18621 184 aaKnown RBP13.15□□□□□ -0.3
GGA2-213ENST00000568922 TUFMP49411 452 aaKnown RBP13.15□□□□□ -0.3
GGA2-213ENST00000568922 GPR15P49685 360 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 YWHAGP61981 247 aaKnown RBP eCLIP13.15□□□□□ -0.3
GGA2-213ENST00000568922 DEUP1Q05D60 604 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
GGA2-213ENST00000568922 PDK2Q15119 407 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 TAZQ16635 292 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
GGA2-213ENST00000568922 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 MAATS1Q7Z4T9 603 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 VSIG1Q86XK7 387 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 PSTKQ8IV42 348 aaKnown RBP13.15□□□□□ -0.3
GGA2-213ENST00000568922 MAP7D3Q8IWC1 876 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 ZDHHC14Q8IZN3 488 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 ARHGAP18Q8N392 663 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 TTC9BQ8N6N2 239 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 C12orf50Q8NA57 414 aaPredicted RBP13.15□□□□□ -0.3
GGA2-213ENST00000568922 ZNF461Q8TAF7 563 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 DPF3Q92784 378 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 SNRNP25Q9BV90 132 aaKnown RBP13.15□□□□□ -0.3
GGA2-213ENST00000568922 HEMGNQ9BXL5 484 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
GGA2-213ENST00000568922 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
GGA2-213ENST00000568922 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.15□□□□□ -0.3
GGA2-213ENST00000568922 FAM92AA1XBS5 289 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 ABLIM3O94929 683 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 F9P00740 461 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 ARSEP51690 589 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 AIF1P55008 147 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 CDH6P55285 790 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 LLGL1Q15334 1064 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 RASIP1Q5U651 963 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 SDHAF4Q5VUM1 108 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 BTBD8Q5XKL5 378 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 ANKS1BQ7Z6G8 1248 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 MON1AQ86VX9 555 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 FAM71BQ8TC56 605 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 MAGOHBQ96A72 148 aaKnown RBP13.14□□□□□ -0.31
GGA2-213ENST00000568922 HERPUD2Q9BSE4 406 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 LRRC19Q9H756 370 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 TMEM51Q9NW97 253 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 FNIP2Q9P278 1114 aa13.14□□□□□ -0.31
GGA2-213ENST00000568922 RAB21Q9UL25 225 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms