RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 B3GALNT2Q8NCR0 500 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 TMEM176AQ96HP8 235 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 NSUN3Q9H649 340 aaKnown RBP16.16■□□□□ 0.18
VAC14-211ENST00000568886 GRHL1Q9NZI5 618 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 RTN2O75298 545 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 ABLIM3O94929 683 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 PTPN1P18031 435 aaKnown RBP16.16■□□□□ 0.18
VAC14-211ENST00000568886 RAD23BP54727 409 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 GPC5P78333 572 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 QPCTQ16769 361 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 DENND2CQ68D51 928 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 TMEM270Q6UE05 265 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 ADAT2Q7Z6V5 191 aaKnown RBP16.16■□□□□ 0.18
VAC14-211ENST00000568886 CROCCP2Q86T23 111 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 PRELID2Q8N945 189 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 SLC4A11Q8NBS3 891 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 P3H4Q92791 437 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 SEC16BQ96JE7 1060 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 ELOVL4Q9GZR5 314 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 LRRC4CQ9HCJ2 640 aa16.16■□□□□ 0.18
VAC14-211ENST00000568886 OR1D2P34982 312 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 BPIFB4P59827 614 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 ROR1Q01973 937 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 KCTD19Q17RG1 926 aaPredicted RBP16.15■□□□□ 0.18
VAC14-211ENST00000568886 ERMARDQ5T6L9 678 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 CCDC13Q8IYE1 715 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 CACNA2D3Q8IZS8 1091 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 RBBP8NLQ8NC74 664 aaPredicted RBP16.15■□□□□ 0.18
VAC14-211ENST00000568886 ZNF461Q8TAF7 563 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 FUBP3Q96I24 572 aaKnown RBP eCLIP16.15■□□□□ 0.18
VAC14-211ENST00000568886 TWNKQ96RR1 684 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 GAS2L1Q99501 681 aaPredicted RBP16.15■□□□□ 0.18
VAC14-211ENST00000568886 CRTAC1Q9NQ79 661 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 HMGXB4Q9UGU5 601 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 AFF4Q9UHB7 1163 aaKnown RBP16.15■□□□□ 0.18
VAC14-211ENST00000568886 ATG2AQ2TAZ0 1938 aa16.15■□□□□ 0.18
VAC14-211ENST00000568886 PDGFRBP09619 1106 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 GZMAP12544 262 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 PLTPP55058 493 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 STILQ15468 1287 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 CYP1B1Q16678 543 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 DUSP6Q16828 381 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 LILRA6Q6PI73 481 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 C4orf50Q6ZRC1 276 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 FBXO25Q8TCJ0 367 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 KRT35Q92764 455 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 C18orf8Q96DM3 657 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 RUNDC3BQ96NL0 473 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 XPO6Q96QU8 1125 aaKnown RBP16.14■□□□□ 0.17
VAC14-211ENST00000568886 FAM129AQ9BZQ8 928 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 SNX24Q9Y343 169 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 MTCH2Q9Y6C9 303 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 TRANK1O15050 2925 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 ADAM12O43184 909 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 SHBGP04278 402 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 VDRP11473 427 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 CPB1P15086 417 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 RPL17P18621 184 aaKnown RBP16.14■□□□□ 0.17
VAC14-211ENST00000568886 ACAT1P24752 427 aaKnown RBP16.14■□□□□ 0.17
VAC14-211ENST00000568886 PEX5P50542 639 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 GKAP1Q5VSY0 366 aaPredicted RBP16.14■□□□□ 0.17
VAC14-211ENST00000568886 ARHGAP17Q68EM7 881 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 SPPL2BQ8TCT7 592 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 CD101Q93033 1021 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 RNF25Q96BH1 459 aaPredicted RBP16.14■□□□□ 0.17
VAC14-211ENST00000568886 TMEM109Q9BVC6 243 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 DPEP3Q9H4B8 488 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 DPP7Q9UHL4 492 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 PCDHA3Q9Y5H8 950 aa16.14■□□□□ 0.17
VAC14-211ENST00000568886 WDR27A2RRH5 827 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 HCRTO43612 131 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 CLASP2O75122 1294 aaKnown RBP16.13■□□□□ 0.17
VAC14-211ENST00000568886 KRT5P13647 590 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 ATF2P15336 505 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 DRD4P21917 467 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 KLRC2P26717 231 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 MARCKSL1P49006 195 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 CLCN4P51793 760 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 SEL1L2Q5TEA6 688 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 ACOT1Q86TX2 421 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 LRRTM3Q86VH5 581 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 EPS8L1Q8TE68 723 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 CHMP6Q96FZ7 201 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 TMEM209Q96SK2 561 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 MTRF1LQ9UGC7 380 aaKnown RBP16.13■□□□□ 0.17
VAC14-211ENST00000568886 NOCTQ9UK39 431 aaKnown RBP16.13■□□□□ 0.17
VAC14-211ENST00000568886 MYBPHLA2RUH7 354 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 GLUD1P00367 558 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 CA8P35219 290 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 MMP13P45452 471 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 RPL21P46778 160 aaKnown RBP16.13■□□□□ 0.17
VAC14-211ENST00000568886 PSMC1P62191 440 aaKnown RBP16.13■□□□□ 0.17
VAC14-211ENST00000568886 ADGRE1Q14246 886 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 SLC39A12Q504Y0 691 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 LACTB2Q53H82 288 aaPredicted RBP16.13■□□□□ 0.17
VAC14-211ENST00000568886 AADACL2Q6P093 401 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 SLC22A17Q8WUG5 538 aa16.13■□□□□ 0.17
VAC14-211ENST00000568886 HNRNPABQ99729 332 aaKnown RBP16.13■□□□□ 0.17
VAC14-211ENST00000568886 TLE6Q9H808 572 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms