RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	PIGZ	Q86VD9	579 aa		10.9	□□□□□ -0.66
UBR1-207	ENST00000568782	ZNF276	Q8N554	614 aa		10.9	□□□□□ -0.66
UBR1-207	ENST00000568782	CAMKK1	Q8N5S9	505 aa		10.9	□□□□□ -0.66
UBR1-207	ENST00000568782	RPLP0P6	Q8NHW5	317 aa		10.9	□□□□□ -0.66
UBR1-207	ENST00000568782	RIN3	Q8TB24	985 aa		10.9	□□□□□ -0.66
UBR1-207	ENST00000568782	CNOT6L	Q96LI5	555 aa	Known RBP	10.9	□□□□□ -0.66
UBR1-207	ENST00000568782	WDR35	Q9P2L0	1181 aa		10.9	□□□□□ -0.66
UBR1-207	ENST00000568782	DEC1	Q9P2X7	70 aa		10.9	□□□□□ -0.66
UBR1-207	ENST00000568782	RASAL2	Q9UJF2	1139 aa		10.9	□□□□□ -0.66
UBR1-207	ENST00000568782	TBC1D3B	A6NDS4	549 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	CHURC1-FNTB	B4DL54	471 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	HHLA1	C9JL84	531 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	SCAMP3	O14828	347 aa	Known RBP	10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	CYBB	P04839	570 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	CYP17A1	P05093	508 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	ERCC5	P28715	1186 aa	Predicted RBP	10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	USP8	P40818	1118 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	YWHAG	P61981	247 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	ZXDB	P98169	803 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	PDE4C	Q08493	712 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	SIM2	Q14190	667 aa	Predicted RBP	10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	E2F5	Q15329	346 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	CNGA2	Q16280	664 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	LY6G5C	Q5SRR4	150 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	SDE2	Q6IQ49	451 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	HTR3D	Q70Z44	454 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	RRAGA	Q7L523	313 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	GPRIN1	Q7Z2K8	1008 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	TRMT11	Q7Z4G4	463 aa	Known RBP	10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	MIB1	Q86YT6	1006 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	UBA3	Q8TBC4	463 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	KLF16	Q9BXK1	252 aa	Predicted RBP	10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	ARHGEF4	Q9NR80	690 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	SPHK2	Q9NRA0	654 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	USP3	Q9Y6I4	520 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	PIEZO1	Q92508	2521 aa		10.89	□□□□□ -0.67
UBR1-207	ENST00000568782	MYO18A	Q92614	2054 aa	Known RBP	10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	CCDC163	A0A0D9SF12	145 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782		M0QYV0	167 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	LILRB5	O75023	590 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	ALDH1A2	O94788	518 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	KAT7	O95251	611 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	TBX18	O95935	607 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	LCP1	P13796	627 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	PTPRZ1	P23471	2315 aa	Predicted RBP	10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	HOXA6	P31267	233 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	GRIA2	P42262	883 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	TNFRSF4	P43489	277 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	FNTB	P49356	437 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	HARS2	P49590	506 aa	Known RBP	10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	SEC13	P55735	322 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	SNX16	P57768	344 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	MRPS21	P82921	87 aa	Known RBP	10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	ADIG	Q0VDE8	80 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	EFEMP1	Q12805	493 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	GAS6	Q14393	721 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	EXOC3L4	Q17RC7	722 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	HSF5	Q4G112	596 aa	Predicted RBP	10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	C2orf27A	Q580R0	203 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	RHBDF2	Q6PJF5	856 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	LCLAT1	Q6UWP7	414 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	CLEC17A	Q6ZS10	378 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	SYT13	Q7L8C5	426 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	BBS7	Q8IWZ6	715 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	NELL1	Q92832	810 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	TRIM62	Q9BVG3	475 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	BBS2	Q9BXC9	721 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	INTS2	Q9H0H0	1204 aa	Known RBP	10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	EPC1	Q9H2F5	836 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	THAP9	Q9H5L6	903 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	NMUR1	Q9HB89	426 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	CNGB3	Q9NQW8	809 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	ST7	Q9NRC1	585 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	ABCC13	Q9NSE7	274 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	MARCH2	Q9P0N8	246 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	NUDT5	Q9UKK9	219 aa		10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	SMG5	Q9UPR3	1016 aa	Known RBP	10.88	□□□□□ -0.67
UBR1-207	ENST00000568782	SPAG17	Q6Q759	2223 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	SLC12A8	A0AV02	714 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	GTPBP10	A4D1E9	387 aa	Known RBP	10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	NEDD8-MDP1	E9PL57	170 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782		O00370	1275 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	SART1	O43290	800 aa	Known RBP	10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	FBXO21	O94952	628 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	APBB3	O95704	486 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	ACADSB	P45954	432 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	DMC1	Q14565	340 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	MAN2A1	Q16706	1144 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	RAB41	Q5JT25	222 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	EOGT	Q5NDL2	527 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	PM20D1	Q6GTS8	502 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	LAIR1	Q6GTX8	287 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	GRAMD4	Q6IC98	578 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	SASS6	Q6UVJ0	657 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	TPGS1	Q6ZTW0	290 aa		10.87	□□□□□ -0.67

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