RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 CTNNBL1Q8WYA6 563 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 OVCA2Q8WZ82 227 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 FBXO32Q969P5 355 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 ARHGEF26Q96DR7 871 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 MSLNLQ96KJ4 702 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 SLITRK1Q96PX8 696 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 CORO1BQ9BR76 489 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 NMUR1Q9HB89 426 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 LUC7LQ9NQ29 371 aaKnown RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 AVENQ9NQS1 362 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 ASNSD1Q9NWL6 643 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 CLDND1Q9NY35 253 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 GMIPQ9P107 970 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 UXTQ9UBK9 157 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 CNOT8Q9UFF9 292 aaKnown RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 CHORDC1Q9UHD1 332 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 TMEM59LQ9UK28 342 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 TFR2Q9UP52 801 aa8.87□□□□□ -0.99
SF3B3-212ENST00000568539 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.87□□□□□ -0.99
SF3B3-212ENST00000568539 A0A0U1RQJ8 604 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 A0A1W2PQH9 124 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 ZNF840PA6NDX5 716 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 HSF2BPO75031 334 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 TADA3O75528 432 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 GJB6O95452 261 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 LTFP02788 710 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 F11P03951 625 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 FYNP06241 537 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 RHOP08100 348 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 GLI1P08151 1106 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 CCDC175P0C221 793 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 KRT3P12035 628 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 PTPN2P17706 415 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 YWHAGP61981 247 aaKnown RBP eCLIP8.86□□□□□ -0.99
SF3B3-212ENST00000568539 YWHAZP63104 245 aaKnown RBP8.86□□□□□ -0.99
SF3B3-212ENST00000568539 MAMLD1Q13495 774 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 HS1BP3Q53T59 392 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 EFHC1Q5JVL4 640 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 RARS2Q5T160 578 aaKnown RBP8.86□□□□□ -0.99
SF3B3-212ENST00000568539 FAM102AQ5T9C2 384 aaPredicted RBP8.86□□□□□ -0.99
SF3B3-212ENST00000568539 SNX30Q5VWJ9 437 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 BSPRYQ5W0U4 402 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 DNAJC24Q6P3W2 148 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 HFE2Q6ZVN8 426 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 BEND5Q7L4P6 421 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 ARCQ7LC44 396 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 GRASPQ7Z6J2 395 aaPredicted RBP8.86□□□□□ -0.99
SF3B3-212ENST00000568539 GPR149Q86SP6 731 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 ARHGAP18Q8N392 663 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 LEMD2Q8NC56 503 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 ATRIPQ8WXE1 791 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 SMG7Q92540 1137 aaKnown RBP8.86□□□□□ -0.99
SF3B3-212ENST00000568539 SELENOOQ9BVL4 669 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 APOL5Q9BWW9 433 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 ZMYND15Q9H091 742 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 S1PR5Q9H228 398 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 ADAM7Q9H2U9 754 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 ASAH2Q9NR71 780 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 METTL5Q9NRN9 209 aaKnown RBP8.86□□□□□ -0.99
SF3B3-212ENST00000568539 PARVAQ9NVD7 372 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 OSER1Q9NX31 292 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 CLIC5Q9NZA1 410 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 MYO1AQ9UBC5 1043 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 PYCARDQ9ULZ3 195 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 PPP2R2CQ9Y2T4 447 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 SCINQ9Y6U3 715 aa8.86□□□□□ -0.99
SF3B3-212ENST00000568539 A0A1W2PRU2 124 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 TMEM191CA6NGB0 347 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 SIGLEC16A6NMB1 481 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 BTNL10A8MVZ5 291 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 NRG2O14511 850 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-212ENST00000568539 PJA2O43164 708 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 MOSPD3O75425 235 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 DAB1O75553 588 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 GRAP2O75791 330 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 FGF19O95750 216 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 MYL4P12829 197 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 GABRR2P28476 465 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 CDC25CP30307 473 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 RFC1P35251 1148 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-212ENST00000568539 CCR2P41597 374 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 PPP3CCP48454 512 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 RPL7AP62424 266 aaKnown RBP8.85□□□□□ -0.99
SF3B3-212ENST00000568539 NTHL1P78549 312 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 ITIH3Q06033 890 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 TCEAL1Q15170 157 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 CCDC85BQ15834 202 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-212ENST00000568539 SLC5A9Q2M3M2 681 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 PABPC1LQ4VXU2 614 aaKnown RBP8.85□□□□□ -0.99
SF3B3-212ENST00000568539 PRSS36Q5K4E3 855 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 TRNP1Q6NT89 227 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 ZNF662Q6ZS27 426 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 EP400NLQ6ZTU2 488 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 GAREM2Q75VX8 874 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 PDZD4Q76G19 769 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-212ENST00000568539 KIAA1328Q86T90 577 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 EMC1Q8N766 993 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 JOSD2Q8TAC2 188 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 RFFLQ8WZ73 363 aa8.85□□□□□ -0.99
SF3B3-212ENST00000568539 GOLGA1Q92805 767 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms