RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 BEND5Q7L4P6 421 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 RRAGAQ7L523 313 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 ETFBKMTQ8IXQ9 262 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 ARHGAP18Q8N392 663 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 PPM1KQ8N3J5 372 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 PHTF2Q8N3S3 785 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 SHC3Q92529 594 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 EZH1Q92800 747 aaPredicted RBP8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 WBP2Q969T9 261 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 TUBGCP2Q9BSJ2 902 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 NDST4Q9H3R1 872 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 UBE2TQ9NPD8 197 aaPredicted RBP8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 CNGB3Q9NQW8 809 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 CFAP97Q9P2B7 532 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 APEX2Q9UBZ4 518 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 NDRG2Q9UN36 371 aaKnown RBP8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 PCDHB4Q9Y5E5 795 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 PCDHGA2Q9Y5H1 932 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 WNT6Q9Y6F9 365 aa8.61□□□□□ -1.03
HDGFL3-205ENST00000568129 CCDC163A0A0D9SF12 145 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 K7ESF4 209 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 GFRA2O00451 464 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 HOXC11O43248 304 aaPredicted RBP8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 LAMTOR5O43504 91 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 CLSTN1O94985 981 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 ABL1P00519 1130 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 CYP17A1P05093 508 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 EEF1GP26641 437 aaKnown RBP8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 MRE11P49959 708 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 CCR3P51677 355 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 TKTL1P51854 596 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 MFAP3P55082 362 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 SLC8A3P57103 927 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 GRSF1Q12849 480 aaKnown RBP eCLIP8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 IFRD2Q12894 506 aaPredicted RBP8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 GOLGA7BQ2TAP0 167 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 TCP11X2Q5H9J9 407 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 TADA2BQ86TJ2 420 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 TMEM110Q86TL2 294 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 FAM217AQ8IXS0 508 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 RBBP8NLQ8NC74 664 aaPredicted RBP8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 ZNF606Q8WXB4 792 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 IRGQQ8WZA9 623 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 CD101Q93033 1021 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 EXOC4Q96A65 974 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 P2RY13Q9BPV8 354 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 NAA15Q9BXJ9 866 aaKnown RBP8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 SLC4A5Q9BY07 1137 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 SAMSN1Q9NSI8 373 aaKnown RBP8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 SPATA6Q9NWH7 488 aaPredicted RBP8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 ZSCAN32Q9NX65 697 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 SMPD4Q9NXE4 827 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 MARK1Q9P0L2 795 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 HESX1Q9UBX0 185 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 DNMT3LQ9UJW3 386 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 STOML2Q9UJZ1 356 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 FBXO10Q9UK96 956 aa8.6□□□□□ -1.03
HDGFL3-205ENST00000568129 CKAP5Q14008 2032 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 NUP205Q92621 2012 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 DOCK4Q8N1I0 1966 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 KCNJ18B7U540 433 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 K7EQS6 105 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 STC2O76061 302 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 EGFP01133 1207 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 KLKB1P03952 638 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 RALAP11233 206 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 CD19P15391 556 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 ZNF18P17022 549 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 MTIF2P46199 727 aaKnown RBP8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 CXCL12P48061 93 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 NRLP54845 237 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 DAOAP59103 153 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 YWHAGP61981 247 aaKnown RBP eCLIP8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 COG7P83436 770 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 EIF4EBP2Q13542 120 aaPredicted RBP8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 KCNJ12Q14500 433 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 NCAPHQ15003 741 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 TRIP4Q15650 581 aaPredicted RBP8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 CCDC183Q5T5S1 534 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 KLHDC7AQ5VTJ3 777 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 MSANTD2Q6P1R3 559 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 ALYREFQ86V81 257 aaKnown RBP8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 BBS7Q8IWZ6 715 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 FAM71AQ8IYT1 594 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 WDTC1Q8N5D0 677 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 SUMF1Q8NBK3 374 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 CCDC26Q8TAB7 109 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 TTC8Q8TAM2 541 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 UBA3Q8TBC4 463 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 CRACR2AQ9BSW2 395 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 ULBP1Q9BZM6 244 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 LHX5Q9H2C1 402 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 HSD3B7Q9H2F3 369 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 PLCB1Q9NQ66 1216 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 SPHK2Q9NRA0 654 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 OLA1Q9NTK5 396 aaKnown RBP8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 RBM12Q9NTZ6 932 aaKnown RBP8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 ANO10Q9NW15 660 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 TMEM63CQ9P1W3 806 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms