RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 SPHK2Q9NRA0 654 aa15.03■□□□□ -0
COMMD4-216ENST00000567023 CISHQ9NSE2 258 aa15.03■□□□□ -0
COMMD4-216ENST00000567023 OSER1Q9NX31 292 aa15.03■□□□□ -0
COMMD4-216ENST00000567023 SDK1Q7Z5N4 2213 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.02■□□□□ -0
COMMD4-216ENST00000567023 SLC16A3O15427 465 aaKnown RBP15.02■□□□□ -0
COMMD4-216ENST00000567023 SMC2O95347 1197 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 TBX18O95935 607 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 PSEN1P49768 467 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 SEC13P55735 322 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 LRRC63Q05C16 580 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 ANKRD40Q6AI12 368 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 C11orf74Q86VG3 221 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 TMEM25Q86YD3 366 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 SFTPA1Q8IWL2 248 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 IL17RCQ8NAC3 791 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 TSTD1Q8NFU3 115 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 TMEM176AQ96HP8 235 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 CNOT6LQ96LI5 555 aaKnown RBP15.02■□□□□ -0
COMMD4-216ENST00000567023 NMUR1Q9HB89 426 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 ARHGEF4Q9NR80 690 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.02■□□□□ -0
COMMD4-216ENST00000567023 CLIC5Q9NZA1 410 aa15.02■□□□□ -0
COMMD4-216ENST00000567023 CYP26A1O43174 497 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 GDF9O60383 454 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 RHOBTB1O94844 696 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 RARGP13631 454 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 PLA2G4AP47712 749 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 LIMK1P53667 647 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 PMS1P54277 932 aaKnown RBP15.01□□□□□ -0.01
COMMD4-216ENST00000567023 RAD23BP54727 409 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 GOLGA8FQ08AF8 430 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 GOLGA8DPQ0D2H9 430 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 CBWD6Q4V339 395 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 ZNF394Q53GI3 561 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 USP39Q53GS9 565 aaKnown RBP15.01□□□□□ -0.01
COMMD4-216ENST00000567023 CBWD3Q5JTY5 395 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 CBWD5Q5RIA9 395 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 BTBD8Q5XKL5 378 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 ARHGAP17Q68EM7 881 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 TMEM92Q6UXU6 159 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 SLC4A11Q8NBS3 891 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 TATDN2Q93075 761 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 HEXIM2Q96MH2 286 aaKnown RBP15.01□□□□□ -0.01
COMMD4-216ENST00000567023 TSG101Q99816 390 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 DEC1Q9P2X7 70 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 HOOK1Q9UJC3 728 aaKnown RBP15.01□□□□□ -0.01
COMMD4-216ENST00000567023 DNMT3LQ9UJW3 386 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 STARD13Q9Y3M8 1113 aa15.01□□□□□ -0.01
COMMD4-216ENST00000567023 A0A1W2PQH9 124 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 TULP3O75386 442 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 TIE1P35590 1138 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 ELF2Q15723 593 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 RAB41Q5JT25 222 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 EOGTQ5NDL2 527 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 EMC10Q5UCC4 262 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 NUDT18Q6ZVK8 323 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 SCD5Q86SK9 330 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 TADA2BQ86TJ2 420 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 CCDC33Q8N5R6 958 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 ALLCQ8N6M5 410 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 NAT16Q8N8M0 369 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 ANKRD52Q8NB46 1076 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 TXNDC5Q8NBS9 432 aaKnown RBP15□□□□□ -0.01
COMMD4-216ENST00000567023 MDGA1Q8NFP4 955 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 OLIG1Q8TAK6 271 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 SMARCE1Q969G3 411 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 CDK5RAP1Q96SZ6 601 aaKnown RBP15□□□□□ -0.01
COMMD4-216ENST00000567023 ARID3AQ99856 593 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 MARK1Q9P0L2 795 aa15□□□□□ -0.01
COMMD4-216ENST00000567023 DCDC2BA2VCK2 349 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 TBC1D3BA6NDS4 549 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 SGK1O00141 431 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 DCLK1O15075 740 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 PMM2O15305 246 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 CACNG3O60359 315 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 ADAM23O75077 832 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 ALDH1A2O94788 518 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 KLF8O95600 359 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-216ENST00000567023 IRF1P10914 325 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 HNRNPLP14866 589 aaKnown RBP eCLIP14.99□□□□□ -0.01
COMMD4-216ENST00000567023 MPLP40238 635 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 SF3A2Q15428 464 aaKnown RBP14.99□□□□□ -0.01
COMMD4-216ENST00000567023 ANO4Q32M45 955 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 ANO7Q6IWH7 933 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 Q6ZNB5 142 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 TERB1Q8NA31 727 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 SLC35C1Q96A29 364 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 JAKMIP2Q96AA8 810 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 POLMQ9NP87 494 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-216ENST00000567023 VPS45Q9NRW7 570 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 WDR35Q9P2L0 1181 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 ARMCX3Q9UH62 379 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-216ENST00000567023 NAGPAQ9UK23 515 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 LSM7Q9UK45 103 aaKnown RBP14.99□□□□□ -0.01
COMMD4-216ENST00000567023 CIZ1Q9ULV3 898 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-216ENST00000567023 NCOR2Q9Y618 2525 aa14.99□□□□□ -0.01
COMMD4-216ENST00000567023 MYO18AQ92614 2054 aaKnown RBP14.98□□□□□ -0.01
COMMD4-216ENST00000567023 TM4SF5O14894 197 aa14.98□□□□□ -0.01
COMMD4-216ENST00000567023 RALAP11233 206 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms