RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 CLIC5Q9NZA1 410 aa14.38□□□□□ -0.11
SPG7-215ENST00000566682 CYTH4Q9UIA0 394 aa14.38□□□□□ -0.11
SPG7-215ENST00000566682 COL4A3Q01955 1670 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 YJEFN3A6XGL0 299 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 E7ENQ6 273 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 GFPT2O94808 682 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 RALAP11233 206 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 SOX5P35711 763 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 UBASH3AP57075 661 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 DAOAP59103 153 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 YWHAGP61981 247 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPG7-215ENST00000566682 PLCB2Q00722 1185 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 MLF2Q15773 248 aaPredicted RBP14.37□□□□□ -0.11
SPG7-215ENST00000566682 CC2D1AQ6P1N0 951 aaPredicted RBP14.37□□□□□ -0.11
SPG7-215ENST00000566682 PASD1Q8IV76 773 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 SCUBE3Q8IX30 993 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 CSGALNACT1Q8TDX6 532 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 STK32AQ8WU08 396 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 ZFRQ96KR1 1074 aaKnown RBP14.37□□□□□ -0.11
SPG7-215ENST00000566682 FAM83CQ9BQN1 747 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 SLC4A5Q9BY07 1137 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 LHX5Q9H2C1 402 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 MFSD1Q9H3U5 465 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 GTSE1Q9NYZ3 720 aa14.37□□□□□ -0.11
SPG7-215ENST00000566682 TRIOO75962 3097 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 A0A1W2PQC6 194 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 MDM4O15151 490 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 STAT1P42224 750 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 ACADSBP45954 432 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 STARD6P59095 220 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 ZNF445P59923 1031 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 PRKCQQ04759 706 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 TNK2Q07912 1038 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 C10orf120Q5SQS8 335 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 BSPRYQ5W0U4 402 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 BTBD8Q5XKL5 378 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 TRIM68Q6AZZ1 485 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 KLHDC10Q6PID8 442 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 CACNA2D4Q7Z3S7 1137 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 TMEM110Q86TL2 294 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 NOP9Q86U38 636 aaKnown RBP14.36□□□□□ -0.11
SPG7-215ENST00000566682 DDX42Q86XP3 938 aaKnown RBP eCLIP14.36□□□□□ -0.11
SPG7-215ENST00000566682 FLCNQ8NFG4 579 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 TTC8Q8TAM2 541 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 CLEC4CQ8WTT0 213 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 OSCP1Q8WVF1 389 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 IRGQQ8WZA9 623 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 DDX1Q92499 740 aaKnown RBP14.36□□□□□ -0.11
SPG7-215ENST00000566682 SHDQ96IW2 340 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 KLF16Q9BXK1 252 aaPredicted RBP14.36□□□□□ -0.11
SPG7-215ENST00000566682 MIS12Q9H081 205 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 PDCL3Q9H2J4 239 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 LINC00597Q9H2U6 94 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 EBF3Q9H4W6 596 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 DUS2Q9NX74 493 aaKnown RBP14.36□□□□□ -0.11
SPG7-215ENST00000566682 CFAP97Q9P2B7 532 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 DNMT3LQ9UJW3 386 aa14.36□□□□□ -0.11
SPG7-215ENST00000566682 E5RJQ4 531 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 STK25O00506 426 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 FBXO21O94952 628 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 PDCLQ13371 301 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 RUNX3Q13761 415 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 TAF3Q5VWG9 929 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 TPRG1Q6ZUI0 275 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 TADA2BQ86TJ2 420 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 FBXL6Q8N531 539 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 RNF214Q8ND24 703 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 C1orf131Q8NDD1 294 aaKnown RBP14.35□□□□□ -0.11
SPG7-215ENST00000566682 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 WBP2Q969T9 261 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 CPXM1Q96SM3 734 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 CDK5RAP1Q96SZ6 601 aaKnown RBP14.35□□□□□ -0.11
SPG7-215ENST00000566682 TBC1D17Q9HA65 648 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 HPS4Q9NQG7 708 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 ABCC13Q9NSE7 274 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 TJP2Q9UDY2 1190 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 WNT6Q9Y6F9 365 aa14.35□□□□□ -0.11
SPG7-215ENST00000566682 MYOFQ9NZM1 2061 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 OTOL1A6NHN0 477 aaPredicted RBP14.34□□□□□ -0.11
SPG7-215ENST00000566682 SHISA7A6NL88 538 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 SCAMP3O14828 347 aaKnown RBP14.34□□□□□ -0.11
SPG7-215ENST00000566682 PAPSS1O43252 624 aaPredicted RBP14.34□□□□□ -0.11
SPG7-215ENST00000566682 MMEP08473 750 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 IRF1P10914 325 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 ARSAP15289 507 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 CD72P21854 359 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 CDH5P33151 784 aaPredicted RBP14.34□□□□□ -0.11
SPG7-215ENST00000566682 IFNAR2P48551 515 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 KPNA1P52294 538 aaPredicted RBP14.34□□□□□ -0.11
SPG7-215ENST00000566682 EFEMP1Q12805 493 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 PDGFRLQ15198 375 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 EML3Q32P44 896 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 CWF19L1Q69YN2 538 aaKnown RBP14.34□□□□□ -0.11
SPG7-215ENST00000566682 RSRC2Q7L4I2 434 aaKnown RBP14.34□□□□□ -0.11
SPG7-215ENST00000566682 ZNF677Q86XU0 584 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 MIB1Q86YT6 1006 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 KIAA1958Q8N8K9 716 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 EDEM1Q92611 657 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 PPP1R13BQ96KQ4 1090 aa14.34□□□□□ -0.11
SPG7-215ENST00000566682 NOX5Q96PH1 765 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms