RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 NOMO2Q5JPE7 1267 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 TBCELQ5QJ74 424 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 SYPL2Q5VXT5 272 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 GLB1LQ6UWU2 654 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHD9-217ENST00000565832 IFT20Q8IY31 132 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 KATNAL2Q8IYT4 538 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 GLIS1Q8NBF1 620 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 IPO4Q8TEX9 1081 aaKnown RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 RSPH1Q8WYR4 309 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 VWCEQ96DN2 955 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 TNIP3Q96KP6 325 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 SLITRK1Q96PX8 696 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 TSPAN18Q96SJ8 248 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 HNRNPABQ99729 332 aaKnown RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 SMOQ99835 787 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 SYT15Q9BQS2 421 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 HIPK3Q9H422 1215 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 NGRNQ9NPE2 291 aaKnown RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 KRT82Q9NSB4 513 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 PGPEP1Q9NXJ5 209 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 COX16Q9P0S2 106 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 USP18Q9UMW8 372 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 DNMT3AQ9Y6K1 912 aaPredicted RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 SQORQ9Y6N5 450 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 GOLGA6L10A0A0M3HER8 536 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 PSTPIP1O43586 416 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 PHF2O75151 1096 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 ERLIN1O75477 346 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 RNF8O76064 485 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 MAP3K6O95382 1288 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 TRUB2O95900 331 aaKnown RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 EOMESO95936 686 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 USP17L7P0C7H9 530 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 ZSCAN5DPP0CG00 497 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 ETS1P14921 441 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 NPR3P17342 541 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 GPD1P21695 349 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 BDNFP23560 247 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 CYP2F1P24903 491 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 MAN1A1P33908 653 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 CDKN2BP42772 138 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 LHX1P48742 406 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 AARSP49588 968 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHD9-217ENST00000565832 VPS41P49754 854 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 PGFP49763 221 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 TKTL1P51854 596 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 BCAT1P54687 386 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 GYS2P54840 703 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 NRLP54845 237 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 HDAC4P56524 1084 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 FAM193AP78312 1265 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 TAP1Q03518 808 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 GRIK3Q13003 919 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 NNTQ13423 1086 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 HLTFQ14527 1009 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHD9-217ENST00000565832 STILQ15468 1287 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 CA9Q16790 459 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 UBAP2Q5T6F2 1119 aaKnown RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 PPP1R2P3Q6NXS1 205 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 TAS1R1Q7RTX1 841 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 HDXQ7Z353 690 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 MAATS1Q7Z4T9 603 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 TMEM173Q86WV6 379 aaPredicted RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 CEP57Q86XR8 500 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 JAMLQ86YT9 394 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 COLGALT2Q8IYK4 626 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 RCOR2Q8IZ40 523 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 CCDC33Q8N5R6 958 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 DNAJC5GQ8N7S2 189 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 NIPA2Q8N8Q9 360 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 NETO2Q8NC67 525 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 KCTD6Q8NC69 237 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 EXD1Q8NHP7 514 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 CCDC26Q8TAB7 109 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 SCAMP5Q8TAC9 235 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 FAM172AQ8WUF8 416 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 NAP1L3Q99457 506 aaPredicted RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 GPR62Q9BZJ7 368 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 FAM53CQ9NYF3 392 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 WDR35Q9P2L0 1181 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 EGFL7Q9UHF1 273 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 ATP11BQ9Y2G3 1177 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 PCDHB7Q9Y5E2 793 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 YJEFN3A6XGL0 299 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 E7ENQ6 273 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 H3BQF6 201 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 M0QZQ0 153 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 TP73O15350 636 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 ICMTO60725 284 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 CAND2O75155 1236 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 AMHP03971 560 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 FYNP06241 537 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 KDELR1P24390 212 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 IL4RP24394 825 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 RPL21P46778 160 aaKnown RBP6.5□□□□□ -1.37
CHD9-217ENST00000565832 PLTPP55058 493 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 DSC1Q08554 894 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 ADCY1Q08828 1119 aa6.5□□□□□ -1.37
CHD9-217ENST00000565832 IFRD2Q12894 506 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms