RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 CHD8Q9HCK8 2581 aa12.6□□□□□ -0.39
FANCA-218ENST00000565582 MYH10P35580 1976 aa12.6□□□□□ -0.39
FANCA-218ENST00000565582 EPG5Q9HCE0 2579 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 TCRBV21S2A2A0A5A6 115 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 PATE3B3GLJ2 98 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 HOXC11O43248 304 aaPredicted RBP12.59□□□□□ -0.39
FANCA-218ENST00000565582 GREM1O60565 184 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 ADRB1P08588 477 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 GRIA2P42262 883 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 WASP42768 502 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 MRPS21P82921 87 aaKnown RBP12.59□□□□□ -0.39
FANCA-218ENST00000565582 ADAM9Q13443 819 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 NFIL3Q16649 462 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 USP39Q53GS9 565 aaKnown RBP12.59□□□□□ -0.39
FANCA-218ENST00000565582 C10orf76Q5T2E6 689 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 PPP1R26Q5T8A7 1209 aaPredicted RBP12.59□□□□□ -0.39
FANCA-218ENST00000565582 BTBD8Q5XKL5 378 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 PMS2CLQ68D20 193 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 MIB1Q86YT6 1006 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 ERCC4Q92889 916 aaPredicted RBP12.59□□□□□ -0.39
FANCA-218ENST00000565582 EDEM2Q9BV94 578 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 KLF16Q9BXK1 252 aaPredicted RBP12.59□□□□□ -0.39
FANCA-218ENST00000565582 CYP3A43Q9HB55 503 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 TMEM8AQ9HCN3 771 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 SPHK2Q9NRA0 654 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 VPS45Q9NRW7 570 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 COMMD8Q9NX08 183 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 BCCIPQ9P287 314 aaKnown RBP eCLIP12.59□□□□□ -0.39
FANCA-218ENST00000565582 HCN2Q9UL51 889 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 SCML2Q9UQR0 700 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
FANCA-218ENST00000565582 BCLAF3A2AJT9 711 aaKnown RBP12.58□□□□□ -0.4
FANCA-218ENST00000565582 TBC1D3BA6NDS4 549 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.58□□□□□ -0.4
FANCA-218ENST00000565582 NEDD8-MDP1E9PL57 170 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 FOXD2O60548 495 aaPredicted RBP12.58□□□□□ -0.4
FANCA-218ENST00000565582 CAVIN2O95810 425 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 RARGP13631 454 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 RPL13P26373 211 aaKnown RBP12.58□□□□□ -0.4
FANCA-218ENST00000565582 DHPSP49366 369 aaPredicted RBP12.58□□□□□ -0.4
FANCA-218ENST00000565582 MXI1P50539 228 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 LIMK1P53667 647 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 DCAF17Q5H9S7 520 aaPredicted RBP12.58□□□□□ -0.4
FANCA-218ENST00000565582 C10orf120Q5SQS8 335 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 RNF43Q68DV7 783 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 TPGS1Q6ZTW0 290 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 CYP2U1Q7Z449 544 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 SCD5Q86SK9 330 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 ZNF513Q8N8E2 541 aaPredicted RBP12.58□□□□□ -0.4
FANCA-218ENST00000565582 TERB1Q8NA31 727 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 OTUB2Q96DC9 234 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 P2RY11Q96G91 374 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 CYLDQ9NQC7 956 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 DNAJC17Q9NVM6 304 aaKnown RBP12.58□□□□□ -0.4
FANCA-218ENST00000565582 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.58□□□□□ -0.4
FANCA-218ENST00000565582 DEC1Q9P2X7 70 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 NAGPAQ9UK23 515 aa12.58□□□□□ -0.4
FANCA-218ENST00000565582 ATXN2Q99700 1313 aaKnown RBP12.58□□□□□ -0.4
FANCA-218ENST00000565582 ACACBO00763 2458 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 LNP1A1A4G5 178 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 ALDH1A2O94788 518 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 TYRP14679 529 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 TRIM21P19474 475 aaKnown RBP12.57□□□□□ -0.4
FANCA-218ENST00000565582 ATP5C1P36542 298 aaKnown RBP12.57□□□□□ -0.4
FANCA-218ENST00000565582 TNFRSF4P43489 277 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 KIF11P52732 1056 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 CBWD3Q5JTY5 395 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 EOGTQ5NDL2 527 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 CBWD5Q5RIA9 395 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 EGFLAMQ63HQ2 1017 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 KRT39Q6A163 491 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 GRAMD4Q6IC98 578 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 TOGARAM2Q6ZUX3 1019 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 TMEFF1Q8IYR6 380 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 PGBD3Q8N328 593 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 CCDC150Q8NCX0 1101 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 OLIG1Q8TAK6 271 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 TATDN2Q93075 761 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 ACOX2Q99424 681 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 BBS2Q9BXC9 721 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 POLMQ9NP87 494 aaPredicted RBP12.57□□□□□ -0.4
FANCA-218ENST00000565582 CISHQ9NSE2 258 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 PLK2Q9NYY3 685 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 MBD1Q9UIS9 605 aaPredicted RBP12.57□□□□□ -0.4
FANCA-218ENST00000565582 RASAL2Q9UJF2 1139 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 LSM7Q9UK45 103 aaKnown RBP12.57□□□□□ -0.4
FANCA-218ENST00000565582 PCDHA5Q9Y5H7 936 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
FANCA-218ENST00000565582 ABCA7Q8IZY2 2146 aa12.56□□□□□ -0.4
FANCA-218ENST00000565582 A0A0A0MRY4 1105 aa12.56□□□□□ -0.4
FANCA-218ENST00000565582 TRIM49BA6NDI0 452 aa12.56□□□□□ -0.4
FANCA-218ENST00000565582 C4orf47A7E2U8 309 aa12.56□□□□□ -0.4
FANCA-218ENST00000565582 PRRT4C9JH25 899 aa12.56□□□□□ -0.4
FANCA-218ENST00000565582 TM4SF5O14894 197 aa12.56□□□□□ -0.4
FANCA-218ENST00000565582 HMBSP08397 361 aa12.56□□□□□ -0.4
FANCA-218ENST00000565582 EPB41P11171 864 aaKnown RBP12.56□□□□□ -0.4
FANCA-218ENST00000565582 HOXB2P14652 356 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms