RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ENPEPQ07075 957 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 EDRF1Q3B7T1 1238 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 AASDHQ4L235 1098 aaPredicted RBP25.06■■□□□ 1.6
RAB40C-209ENST00000565511 SCD5Q86SK9 330 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 CNOT6LQ96LI5 555 aaKnown RBP25.06■■□□□ 1.6
RAB40C-209ENST00000565511 IMPG2Q9BZV3 1241 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 FBXO44Q9H4M3 255 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 CYLDQ9NQC7 956 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 TLR8Q9NR97 1041 aaKnown RBP25.06■■□□□ 1.6
RAB40C-209ENST00000565511 SPHK2Q9NRA0 654 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 LAMA1P25391 3075 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 RPL13P26373 211 aaKnown RBP25.05■■□□□ 1.6
RAB40C-209ENST00000565511 GRIA2P42262 883 aa25.05■■□□□ 1.6
RAB40C-209ENST00000565511 PRCPP42785 496 aa25.05■■□□□ 1.6
RAB40C-209ENST00000565511 GAD2Q05329 585 aa25.05■■□□□ 1.6
RAB40C-209ENST00000565511 KRT39Q6A163 491 aa25.05■■□□□ 1.6
RAB40C-209ENST00000565511 TTC30AQ86WT1 665 aa25.05■■□□□ 1.6
RAB40C-209ENST00000565511 TATDN2Q93075 761 aa25.05■■□□□ 1.6
RAB40C-209ENST00000565511 OTUB2Q96DC9 234 aa25.05■■□□□ 1.6
RAB40C-209ENST00000565511 DUSP9Q99956 384 aaKnown RBP25.05■■□□□ 1.6
RAB40C-209ENST00000565511 NACA2Q9H009 215 aa25.05■■□□□ 1.6
RAB40C-209ENST00000565511 ACACBO00763 2458 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 MXI1P50539 228 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 KIF11P52732 1056 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 CBWD6Q4V339 395 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 PPM1JQ5JR12 505 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 CBWD3Q5JTY5 395 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 CBWD5Q5RIA9 395 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 HTR3DQ70Z44 454 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 MIB1Q86YT6 1006 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 FRMD1Q8N878 549 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 SLC4A11Q8NBS3 891 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 ENGASEQ8NFI3 743 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.04■■□□□ 1.6
RAB40C-209ENST00000565511 PCDHGA5Q9Y5G8 931 aa25.04■■□□□ 1.6
RAB40C-209ENST00000565511 GBP1P32455 592 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 GTF2H1P32780 548 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 RAD23BP54727 409 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 ANO4Q32M45 955 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 PMS2CLQ68D20 193 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 ZC3H3Q8IXZ2 948 aaKnown RBP25.03■■□□□ 1.6
RAB40C-209ENST00000565511 OLIG1Q8TAK6 271 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 RLN3Q8WXF3 142 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 DUSP16Q9BY84 665 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 PNPLA8Q9NP80 782 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 CISHQ9NSE2 258 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 PCDHA5Q9Y5H7 936 aa25.03■■□□□ 1.6
RAB40C-209ENST00000565511 GON4LQ3T8J9 2241 aa25.02■■□□□ 1.6
RAB40C-209ENST00000565511 BCLAF3A2AJT9 711 aaKnown RBP25.02■■□□□ 1.6
RAB40C-209ENST00000565511 TRIM49BA6NDI0 452 aa25.02■■□□□ 1.6
RAB40C-209ENST00000565511 RARGP13631 454 aa25.02■■□□□ 1.6
RAB40C-209ENST00000565511 CREB5Q02930 508 aa25.02■■□□□ 1.6
RAB40C-209ENST00000565511 ELF2Q15723 593 aa25.02■■□□□ 1.6
RAB40C-209ENST00000565511 C12orf50Q8NA57 414 aaPredicted RBP25.02■■□□□ 1.6
RAB40C-209ENST00000565511 CCDC26Q8TAB7 109 aa25.02■■□□□ 1.6
RAB40C-209ENST00000565511 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.01■■□□□ 1.59
RAB40C-209ENST00000565511 TM4SF5O14894 197 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 ATP5C1P36542 298 aaKnown RBP25.01■■□□□ 1.59
RAB40C-209ENST00000565511 TNFRSF4P43489 277 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 LIMK1P53667 647 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 ANKRD40Q6AI12 368 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 Q6ZNB5 142 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 CCDC186Q7Z3E2 898 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 TERB1Q8NA31 727 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 FBXL13Q8NEE6 735 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 VPS45Q9NRW7 570 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 RAB20Q9NX57 234 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 MBD1Q9UIS9 605 aaPredicted RBP25.01■■□□□ 1.59
RAB40C-209ENST00000565511 USP3Q9Y6I4 520 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 EPG5Q9HCE0 2579 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 CHD8Q9HCK8 2581 aa25.01■■□□□ 1.59
RAB40C-209ENST00000565511 NEDD8-MDP1E9PL57 170 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 CETN3O15182 167 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 RHOBTB1O94844 696 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 EPB41P11171 864 aaKnown RBP25■■□□□ 1.59
RAB40C-209ENST00000565511 WASP42768 502 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 USP39Q53GS9 565 aaKnown RBP25■■□□□ 1.59
RAB40C-209ENST00000565511 C10orf76Q5T2E6 689 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 STPG1Q5TH74 334 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 EGFLAMQ63HQ2 1017 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 TPGS1Q6ZTW0 290 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 TOGARAM2Q6ZUX3 1019 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 SPATA20Q8TB22 786 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 ERLEC1Q96DZ1 483 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 HEXIM2Q96MH2 286 aaKnown RBP25■■□□□ 1.59
RAB40C-209ENST00000565511 ACOX2Q99424 681 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 DEC1Q9P2X7 70 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 NAGPAQ9UK23 515 aa25■■□□□ 1.59
RAB40C-209ENST00000565511 TCRBV21S2A2A0A5A6 115 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 TBC1D3BA6NDS4 549 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 TULP2O00295 520 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 FOXD2O60548 495 aaPredicted RBP24.99■■□□□ 1.59
RAB40C-209ENST00000565511 STC2O76061 302 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 KLKB1P03952 638 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 ADRB1P08588 477 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 COBLL1Q53SF7 1204 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 DCAF17Q5H9S7 520 aaPredicted RBP24.99■■□□□ 1.59
RAB40C-209ENST00000565511 C10orf120Q5SQS8 335 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 ZNF658Q5TYW1 1059 aaPredicted RBP24.99■■□□□ 1.59
RAB40C-209ENST00000565511 BTBD8Q5XKL5 378 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms