RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 TLR5O60602 858 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 HLA-DRAP01903 254 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 MYL1P05976 194 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 PRR29P0C7W0 189 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 P4HA1P13674 534 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 KCNA4P22459 653 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 PTGER3P43115 390 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 INCA1Q0VD86 236 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 NFIL3Q16649 462 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 ST3GAL2Q16842 350 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 CEP135Q66GS9 1140 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 PSAPL1Q6NUJ1 521 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 CLEC20AQ6ZU45 233 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 TTC30AQ86WT1 665 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 TERB1Q8NA31 727 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 SPRYD3Q8NCJ5 442 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 TAS1R2Q8TE23 839 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 HNRNPABQ99729 332 aaKnown RBP9.07□□□□□ -0.96
CAPN3-213ENST00000565173 FBXO44Q9H4M3 255 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 POLMQ9NP87 494 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-213ENST00000565173 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.07□□□□□ -0.96
CAPN3-213ENST00000565173 TLR8Q9NR97 1041 aaKnown RBP9.07□□□□□ -0.96
CAPN3-213ENST00000565173 FAM49BQ9NUQ9 324 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 DEC1Q9P2X7 70 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 USP25Q9UHP3 1055 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 ANGPTL2Q9UKU9 493 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 WASF3Q9UPY6 502 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 LAMA5O15230 3695 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 TNRC6BQ9UPQ9 1833 aaKnown RBP9.06□□□□□ -0.96
CAPN3-213ENST00000565173 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 A0A1W2PQF6 199 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 CYP26A1O43174 497 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 RHOBTB3O94955 611 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 IRF1P10914 325 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 GABRG2P18507 467 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 DHPSP49366 369 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-213ENST00000565173 VAMP7P51809 220 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 NDUFA8P51970 172 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 PPP3CAQ08209 521 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 DPYDQ12882 1025 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 ANO4Q32M45 955 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 SPDYCQ5MJ68 293 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 PEAR1Q5VY43 1037 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-213ENST00000565173 BTBD8Q5XKL5 378 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 LPCAT2Q7L5N7 544 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 CYP2U1Q7Z449 544 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 SCD5Q86SK9 330 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 HSCBQ8IWL3 235 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 TMEFF1Q8IYR6 380 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 ZNF513Q8N8E2 541 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-213ENST00000565173 HMGB4Q8WW32 186 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 PIGKQ92643 395 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 CYFIP2Q96F07 1278 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 ACOX2Q99424 681 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 NMUR1Q9HB89 426 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 TMEM9BQ9NQ34 198 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
CAPN3-213ENST00000565173 MARK1Q9P0L2 795 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 EVLQ9UI08 416 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-213ENST00000565173 PILRBQ9UKJ0 227 aa9.06□□□□□ -0.96
CAPN3-213ENST00000565173 PLXND1Q9Y4D7 1925 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 MYO18AQ92614 2054 aaKnown RBP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 A0A1W2PQH9 124 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 TCRBV21S2A2A0A5A6 115 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 PRRT4C9JH25 899 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 MDM4O15151 490 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 CALUO43852 315 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 CACNG3O60359 315 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 CILPO75339 1184 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 HSP90AA1P07900 732 aaKnown RBP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 CISD3P0C7P0 127 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 FAM200BP0CF97 657 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 TRIM49P0CI25 452 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 TRIM49CP0CI26 452 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 TYRP14679 529 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 CSRP1P21291 193 aaKnown RBP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 ACO1P21399 889 aaKnown RBP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 ADORA2BP29275 332 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 NTSR1P30989 418 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 ATP5C1P36542 298 aaKnown RBP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 PIK3CAP42336 1068 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 GCLMP48507 274 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 NOVA1P51513 510 aaKnown RBP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 KIF11P52732 1056 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 ENPEPQ07075 957 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 PREPLQ4J6C6 727 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 C10orf76Q5T2E6 689 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 SH3PXD2AQ5TCZ1 1133 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 DAB2IPQ5VWQ8 1189 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 EGFLAMQ63HQ2 1017 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 KLHDC10Q6PID8 442 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 SLC23A3Q6PIS1 610 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 Q6ZNB5 142 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 TOGARAM2Q6ZUX3 1019 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 TRMT11Q7Z4G4 463 aaKnown RBP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 SYT12Q8IV01 421 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 ZNF276Q8N554 614 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 SEMA4DQ92854 862 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 SPACA7Q96KW9 195 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 GABRG3Q99928 467 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms