RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 STK25O00506 426 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 CAPN9O14815 690 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 OLFM2O95897 454 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 TBX18O95935 607 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 LTFP02788 710 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 TCF3P15923 654 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 PBX1P40424 430 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 RPL34P49207 117 aaKnown RBP16.75■□□□□ 0.27
RAB40C-208ENST00000564703 PGFP49763 221 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 COG7P83436 770 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 FCHO2Q0JRZ9 810 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 TSR1Q2NL82 804 aaKnown RBP16.75■□□□□ 0.27
RAB40C-208ENST00000564703 EFHC1Q5JVL4 640 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 OR6B2Q6IFH4 312 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 TRIM67Q6ZTA4 783 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 BAP1Q92560 729 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 RSPRY1Q96DX4 576 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 SHDQ96IW2 340 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 AGPAT1Q99943 283 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 AIPL1Q9NZN9 384 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
RAB40C-208ENST00000564703 NUDT5Q9UKK9 219 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 PATJQ8NI35 1801 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 NUP210Q8TEM1 1887 aaPredicted RBP16.74■□□□□ 0.27
RAB40C-208ENST00000564703 SLC9A3R1O14745 358 aaPredicted RBP16.74■□□□□ 0.27
RAB40C-208ENST00000564703 GABBR2O75899 941 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 IFNAR2P48551 515 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 ZBED6P86452 979 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 KLHL30Q0D2K2 578 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 EFEMP1Q12805 493 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 MTF1Q14872 753 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 PDGFRLQ15198 375 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 SLC44A4Q53GD3 710 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 SPECC1LQ69YQ0 1117 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 IRF2BP2Q7Z5L9 587 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 MIB1Q86YT6 1006 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 ZDHHC17Q8IUH5 632 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 KIAA1958Q8N8K9 716 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 SLC20A1Q8WUM9 679 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 CPA5Q8WXQ8 436 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 EDEM1Q92611 657 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 C18orf8Q96DM3 657 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 LRRC3BQ96PB8 259 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 CPXM1Q96SM3 734 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 C1QTNF1Q9BXJ1 281 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 MFSD1Q9H3U5 465 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 SMOC2Q9H3U7 446 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 DUS2Q9NX74 493 aaKnown RBP16.74■□□□□ 0.27
RAB40C-208ENST00000564703 MARCH2Q9P0N8 246 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 CFAP97Q9P2B7 532 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 TBC1D14Q9P2M4 693 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 CYTH4Q9UIA0 394 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 RASAL2Q9UJF2 1139 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 LSM7Q9UK45 103 aaKnown RBP16.74■□□□□ 0.27
RAB40C-208ENST00000564703 CAPN11Q9UMQ6 739 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 A0A0C4DFX4 3053 aa16.74■□□□□ 0.27
RAB40C-208ENST00000564703 MYO16Q9Y6X6 1858 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 E2F8A0AVK6 867 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 NCAM1P13591 858 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 CDH5P33151 784 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-208ENST00000564703 KPNA1P52294 538 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-208ENST00000564703 YWHAZP63104 245 aaKnown RBP16.73■□□□□ 0.27
RAB40C-208ENST00000564703 NR1H3Q13133 447 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 TRIM14Q14142 442 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 NAA35Q5VZE5 725 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 SARM1Q6SZW1 724 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 TOGARAM2Q6ZUX3 1019 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 GAS2L3Q86XJ1 694 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 CLEC4CQ8WTT0 213 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 DNASE1L2Q92874 299 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 KLF16Q9BXK1 252 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-208ENST00000564703 TRPV5Q9NQA5 729 aa16.73■□□□□ 0.27
RAB40C-208ENST00000564703 BZW2Q9Y6E2 419 aaKnown RBP16.73■□□□□ 0.27
RAB40C-208ENST00000564703 SLC12A8A0AV02 714 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 TMEM221A6NGB7 291 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 M0R296 226 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 PAPSS1O43252 624 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-208ENST00000564703 GLI1P08151 1106 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 IRF1P10914 325 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 CHRNB2P17787 502 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 NSFP46459 744 aaKnown RBP16.72■□□□□ 0.27
RAB40C-208ENST00000564703 AMPD2Q01433 879 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 FMO1Q01740 532 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 SLC6A3Q01959 620 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 ZNF77Q15935 545 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 SIX5Q8N196 739 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 OSCP1Q8WVF1 389 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 SYN2Q92777 582 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-208ENST00000564703 ZFYVE19Q96K21 471 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 TTYH3Q9C0H2 523 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 POPDC2Q9HBU9 364 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 CA14Q9ULX7 337 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 BDP1A6H8Y1 2624 aa16.72■□□□□ 0.27
RAB40C-208ENST00000564703 MDM4O15151 490 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 CYP1A1P04798 512 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-208ENST00000564703 GLULP15104 373 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 CASP14P31944 242 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 NOMO3P69849 1222 aa16.71■□□□□ 0.27
RAB40C-208ENST00000564703 PRKCQQ04759 706 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms