RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 COL4A3Q01955 1670 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 SHISA7A6NL88 538 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 SMTNL1A8MU46 457 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 BECN2A8MW95 431 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 FOXN3O00409 490 aaPredicted RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 PIK3R2O00459 728 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 MDM4O15151 490 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 NFATC1O95644 943 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 IRF1P10914 325 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 COPB1P53618 953 aaKnown RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 PTPN5P54829 565 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 YWHAGP61981 247 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH1-206ENST00000564676 PTK2Q05397 1052 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 RAPGEF1Q13905 1077 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 DRAP1Q14919 205 aaPredicted RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 NCAPHQ15003 741 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 PON2Q15165 354 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 EML3Q32P44 896 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 KLHDC7AQ5VTJ3 777 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 BTBD8Q5XKL5 378 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 PMF1Q6P1K2 205 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 KLHDC10Q6PID8 442 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 RSRC2Q7L4I2 434 aaKnown RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 KIAA1958Q8N8K9 716 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 PRSS33Q8NF86 280 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 SLC35F5Q8WV83 523 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 ZNF606Q8WXB4 792 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 KCTD13Q8WZ19 329 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 SHC3Q92529 594 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 NDRG1Q92597 394 aaKnown RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 EXOC4Q96A65 974 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 HSFY1Q96LI6 401 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 PCMTD1Q96MG8 357 aaPredicted RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 CDK5RAP1Q96SZ6 601 aaKnown RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 LMAN1LQ9HAT1 526 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 ACP6Q9NPH0 428 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH1-206ENST00000564676 CLIC5Q9NZA1 410 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 TBC1D14Q9P2M4 693 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 DNMT3LQ9UJW3 386 aa10.44□□□□□ -0.74
CDH1-206ENST00000564676 AJAP1Q9UKB5 411 aaPredicted RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 ARIH1Q9Y4X5 557 aaPredicted RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 HELZP42694 1942 aaKnown RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 KIF26AQ9ULI4 1882 aaPredicted RBP10.44□□□□□ -0.74
CDH1-206ENST00000564676 MYOFQ9NZM1 2061 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 E2F8A0AVK6 867 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 SYCE3A1L190 88 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 OTOL1A6NHN0 477 aaPredicted RBP10.43□□□□□ -0.74
CDH1-206ENST00000564676 GJA4P35212 333 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 MAGEA9P43362 315 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 ZNF165P49910 485 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 EFEMP1Q12805 493 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 TCF15Q12870 199 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 LRRC32Q14392 662 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 PM20D1Q6GTS8 502 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 DENND1BQ6P3S1 775 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 TXNDC11Q6PKC3 985 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 MIB1Q86YT6 1006 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 ZNF276Q8N554 614 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 RNF139Q8WU17 664 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 CLDN23Q96B33 292 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 ZFRQ96KR1 1074 aaKnown RBP10.43□□□□□ -0.74
CDH1-206ENST00000564676 BPIFA3Q9BQP9 254 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 KLF16Q9BXK1 252 aaPredicted RBP10.43□□□□□ -0.74
CDH1-206ENST00000564676 IRF2BPLQ9H1B7 796 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 CNGB3Q9NQW8 809 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 ST7Q9NRC1 585 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 SPATA6Q9NWH7 488 aaPredicted RBP10.43□□□□□ -0.74
CDH1-206ENST00000564676 DLGAP2Q9P1A6 1054 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 LIMA1Q9UHB6 759 aaKnown RBP10.43□□□□□ -0.74
CDH1-206ENST00000564676 RASAL2Q9UJF2 1139 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 LSM7Q9UK45 103 aaKnown RBP10.43□□□□□ -0.74
CDH1-206ENST00000564676 STRIP2Q9ULQ0 834 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 FHOD1Q9Y613 1164 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 CACNA1IQ9P0X4 2223 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 ATG2BQ96BY7 2078 aa10.43□□□□□ -0.74
CDH1-206ENST00000564676 SLC12A8A0AV02 714 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 LRRC10BA6NIK2 292 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 H0Y858 1186 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 FBXO21O94952 628 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 HMBSP08397 361 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 PNMA6AP0CW24 399 aaPredicted RBP10.42□□□□□ -0.74
CDH1-206ENST00000564676 CHRNB1P11230 501 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 UCHL3P15374 230 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 ZNF18P17022 549 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 KRT9P35527 623 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 GPD2P43304 727 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 ACADSBP45954 432 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 GALK1P51570 392 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 DAOAP59103 153 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 BPIFB4P59827 614 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 COG7P83436 770 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 UBXN1Q04323 297 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 GRSF1Q12849 480 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDH1-206ENST00000564676 DHCR24Q15392 516 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 SKOR2Q2VWA4 1001 aaPredicted RBP10.42□□□□□ -0.74
CDH1-206ENST00000564676 DGKKQ5KSL6 1271 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 BSPRYQ5W0U4 402 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 SMYD5Q6GMV2 418 aa10.42□□□□□ -0.74
CDH1-206ENST00000564676 DPY19L2P1Q6NXN4 242 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms