RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PIK3R5Q8WYR1 880 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 C18orf25Q96B23 403 aaPredicted RBP7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 RNF25Q96BH1 459 aaPredicted RBP7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 MCRS1Q96EZ8 462 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SNF8Q96H20 258 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZMAT2Q96NC0 199 aaKnown RBP7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 HEMGNQ9BXL5 484 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TSPYL1Q9H0U9 437 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GOLGA2P5Q9HBQ8 144 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CHST7Q9NS84 486 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 KLHL11Q9NVR0 708 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ASNSD1Q9NWL6 643 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 WHRNQ9P202 907 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CYTH4Q9UIA0 394 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TSPAN16Q9UKR8 245 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ATP8A1Q9Y2Q0 1164 aa7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.78□□□□□ -1.16
MAP1LC3B-205ENST00000564638 BRWD1Q9NSI6 2320 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 hCG_1818297A0A087WSY0 165 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SMIM28A0A1B0GU29 152 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 A6NNZ2 444 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 C5orf67F2Z3F1 127 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 F8W810 466 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PI4K2BG5E9Z4 385 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 NRP1O14786 923 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 INPPL1O15357 1258 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 LPXNO60711 386 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 RNF8O76064 485 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 GPD1P21695 349 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 RDXP35241 583 aaKnown RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 RFC1P35251 1148 aaPredicted RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 FLT3P36888 993 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 GPD2P43304 727 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PMS2P54278 862 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 BCAT1P54687 386 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 MRPS5P82675 430 aaKnown RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 DSC1Q08554 894 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ZNF844Q08AG5 666 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TUSC3Q13454 348 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 LLGL1Q15334 1064 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SKIV2LQ15477 1246 aaKnown RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 UAP1Q16222 522 aaPredicted RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TUBB8Q3ZCM7 444 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 XKR4Q5GH76 650 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TFDP3Q5H9I0 405 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 AGBL2Q5U5Z8 902 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PLPP4Q5VZY2 271 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 KAZNQ674X7 775 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 DENND2CQ68D51 928 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ARHGAP17Q68EM7 881 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 OR6B2Q6IFH4 312 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 MFSD7Q6UXD7 560 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ALKAL1Q6UXT8 129 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 GSTA5Q7RTV2 222 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ACOT1Q86TX2 421 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TMEM173Q86WV6 379 aaPredicted RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CCDC89Q8N998 374 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 GSTCDQ8NEC7 633 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 UBA3Q8TBC4 463 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 FBXO25Q8TCJ0 367 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SPPL3Q8TCT6 385 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 MICAL1Q8TDZ2 1067 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 BCL7CQ8WUZ0 217 aaPredicted RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ART4Q93070 314 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ARL8AQ96BM9 186 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 IGSF21Q96ID5 467 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ATP6V1G3Q96LB4 118 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PPP1R10Q96QC0 940 aaKnown RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 MRPL45Q9BRJ2 306 aaKnown RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TMEM175Q9BSA9 504 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 HERPUD2Q9BSE4 406 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 COLEC11Q9BWP8 271 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 FRMD8P1Q9BZ68 369 aaPredicted RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TXLNGYQ9BZA5 131 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SNX25Q9H3E2 840 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ZWILCHQ9H900 591 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TMBIM4Q9HC24 238 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ENTPD7Q9NQZ7 604 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 FAM49BQ9NUQ9 324 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 SLC38A7Q9NVC3 462 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 THEGQ9P2T0 379 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TJP2Q9UDY2 1190 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 R3HDM2Q9Y2K5 976 aaKnown RBP7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 HCN4Q9Y3Q4 1203 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CFAP47Q6ZTR5 3102 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 DNAH14Q0VDD8 3507 aa7.77□□□□□ -1.17
MAP1LC3B-205ENST00000564638 ZDBF2Q9HCK1 2354 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 CARNS1A5YM72 827 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 FAM86C2PA6NEL3 165 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 A8MXQ7 604 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 KPNA7A9QM74 516 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 E5RJQ4 531 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 PIRO00625 290 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 DPYSL4O14531 572 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 LIASO43766 372 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 HUS1O60921 280 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 LRCH4O75427 683 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 TADA2AO75478 443 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 KRT14P02533 472 aa7.76□□□□□ -1.17
MAP1LC3B-205ENST00000564638 NUDT17P0C025 328 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms