RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 RASSF3Q86WH2 238 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 BBS7Q8IWZ6 715 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 C12orf29Q8N999 325 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 IL17RCQ8NAC3 791 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 MDGA1Q8NFP4 955 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 ELMO3Q96BJ8 720 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 CNTNAP3BQ96NU0 1288 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 TSG101Q99816 390 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 BBS2Q9BXC9 721 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 NUSAP1Q9BXS6 441 aaKnown RBP10.08□□□□□ -0.8
CLN6-203ENST00000563917 CNTNAP3Q9BZ76 1288 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 TMEM8AQ9HCN3 771 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 PNPLA8Q9NP80 782 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 DNAJC17Q9NVM6 304 aaKnown RBP10.08□□□□□ -0.8
CLN6-203ENST00000563917 HOOK1Q9UJC3 728 aaKnown RBP10.08□□□□□ -0.8
CLN6-203ENST00000563917 DNMT3LQ9UJW3 386 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 NAGPAQ9UK23 515 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 ZNF510Q9Y2H8 683 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 DMXL1Q9Y485 3027 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 MYH10P35580 1976 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 TCRBV21S2A2A0A5A6 115 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 NEDD8-MDP1E9PL57 170 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 SGK1O00141 431 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 AP5Z1O43299 807 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 TULP3O75386 442 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 BEST1O76090 585 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 ZNF202O95125 648 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 TRIM49P0CI25 452 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 TRIM49CP0CI26 452 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 RARGP13631 454 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 HOXB2P14652 356 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 NTSR1P30989 418 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 MXI1P50539 228 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 ATXN3P54252 364 aaPredicted RBP10.07□□□□□ -0.8
CLN6-203ENST00000563917 YWHAEP62258 255 aaKnown RBP10.07□□□□□ -0.8
CLN6-203ENST00000563917 COG7P83436 770 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 DPYDQ12882 1025 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 LMAN2Q12907 356 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 GAB4Q2WGN9 574 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 EDRF1Q3B7T1 1238 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 SPDYCQ5MJ68 293 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 TCERG1LQ5VWI1 586 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 SLC36A4Q6YBV0 504 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 TPGS1Q6ZTW0 290 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 HTR3DQ70Z44 454 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 RSRC2Q7L4I2 434 aaKnown RBP10.07□□□□□ -0.8
CLN6-203ENST00000563917 C12orf40Q86WS4 652 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 TMEM25Q86YD3 366 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 ARHGAP18Q8N392 663 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 TERB1Q8NA31 727 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 TAS1R2Q8TE23 839 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 PIGKQ92643 395 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 FAXDC2Q96IV6 333 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 HEXIM2Q96MH2 286 aaKnown RBP10.07□□□□□ -0.8
CLN6-203ENST00000563917 GTPBP4Q9BZE4 634 aaKnown RBP10.07□□□□□ -0.8
CLN6-203ENST00000563917 SMOC1Q9H4F8 434 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 FAM124BQ9H5Z6 455 aaPredicted RBP10.07□□□□□ -0.8
CLN6-203ENST00000563917 TMEM9BQ9NQ34 198 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 CYLDQ9NQC7 956 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 HMGXB4Q9UGU5 601 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 ANGPTL2Q9UKU9 493 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 STRIP2Q9ULQ0 834 aa10.07□□□□□ -0.8
CLN6-203ENST00000563917 NCOR2Q9Y618 2525 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 FAM237AA0A1B0GTK4 181 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 A0A1W2PQH9 124 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 C4orf47A7E2U8 309 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 CYP26A1O43174 497 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 CILPO75339 1184 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 ZNF217O75362 1048 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 SMC2O95347 1197 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 TBX18O95935 607 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 CYBBP04839 570 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 PRR29P0C7W0 189 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 TYRP14679 529 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 CHKAP35790 457 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 P2RY2P41231 377 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 KIR2DL1P43626 348 aaPredicted RBP10.06□□□□□ -0.8
CLN6-203ENST00000563917 DGKGP49619 791 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 ZNF394Q53GI3 561 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 EMC10Q5UCC4 262 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 LYSMD4Q5XG99 296 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 TCEAL6Q6IPX3 200 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 KLHDC10Q6PID8 442 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 TMEM92Q6UXU6 159 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 CLEC20AQ6ZU45 233 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 ARMCX6Q7L4S7 300 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 RABEPKQ7Z6M1 372 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 CHPFQ8IZ52 775 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 FBXL13Q8NEE6 735 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 ZMIZ2Q8NF64 920 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 UCMAQ8WVF2 138 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 RLN3Q8WXF3 142 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 TCEAL3Q969E4 200 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 ZFRQ96KR1 1074 aaKnown RBP10.06□□□□□ -0.8
CLN6-203ENST00000563917 LSM14BQ9BX40 385 aaKnown RBP10.06□□□□□ -0.8
CLN6-203ENST00000563917 KLF16Q9BXK1 252 aaPredicted RBP10.06□□□□□ -0.8
CLN6-203ENST00000563917 DUSP16Q9BY84 665 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 DCLK3Q9C098 648 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 RXFP3Q9NSD7 469 aa10.06□□□□□ -0.8
CLN6-203ENST00000563917 DCHS1Q96JQ0 3298 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms