RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 IGHV1OR15-9A0A0B4J2B8 117 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 SPAARA0A1B0GVQ0 90 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 SRRM3A6NNA2 597 aaPredicted RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 STX6O43752 255 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 HYAL3O43820 417 aaPredicted RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 CACNG3O60359 315 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 GREM1O60565 184 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 TLR5O60602 858 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 OPHN1O60890 802 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 AP1G2O75843 785 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 RDXP35241 583 aaKnown RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 CASP4P49662 377 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 BIRC3Q13489 604 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 NCOA4Q13772 614 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 HNRNPDQ14103 355 aaKnown RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 KNOP1Q1ED39 458 aaKnown RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 ZMIZ2Q8NF64 920 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 GOLGA5Q8TBA6 731 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 PLEKHO2Q8TD55 490 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 PARD3BQ8TEW8 1205 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 ZCCHC14Q8WYQ9 949 aaKnown RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 WBP2Q969T9 261 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 XPO6Q96QU8 1125 aaKnown RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 GABRG3Q99928 467 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 GTPBP2Q9BX10 602 aaKnown RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 TLR8Q9NR97 1041 aaKnown RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 DNAJC17Q9NVM6 304 aaKnown RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 WDR35Q9P2L0 1181 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 PCNX2A6NKB5 2137 aa19.75■□□□□ 0.75
NME3-204ENST00000563498 CEP192Q8TEP8 1941 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 PVALEFA0A1B0GWK0 134 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 A0A1W2PQD8 194 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 FAM221BA6H8Z2 402 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 ARHGAP33O14559 1287 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 TRIM24O15164 1050 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 CUTAO60888 179 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 IRF1P10914 325 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 P4HA1P13674 534 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 EGFLAMQ63HQ2 1017 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 SHC4Q6S5L8 630 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 ACOT1Q86TX2 421 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 CHPFQ8IZ52 775 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 CRYBG2Q8N1P7 616 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 IPO4Q8TEX9 1081 aaKnown RBP19.74■□□□□ 0.75
NME3-204ENST00000563498 TMEM174Q8WUU8 243 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 ZNF396Q96N95 335 aaPredicted RBP19.74■□□□□ 0.75
NME3-204ENST00000563498 SMOQ99835 787 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 KLF16Q9BXK1 252 aaPredicted RBP19.74■□□□□ 0.75
NME3-204ENST00000563498 SDCBP2Q9H190 292 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 CYLDQ9NQC7 956 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 DNAAF2Q9NVR5 837 aaKnown RBP19.74■□□□□ 0.75
NME3-204ENST00000563498 CACNA1GO43497 2377 aa19.74■□□□□ 0.75
NME3-204ENST00000563498 LRRIQ3A6PVS8 624 aaPredicted RBP19.73■□□□□ 0.75
NME3-204ENST00000563498 YEATS4O95619 227 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 C4BPAP04003 597 aaKnown RBP19.73■□□□□ 0.75
NME3-204ENST00000563498 SYPP08247 313 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 TYRP14679 529 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 NDUFV2P19404 249 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 WASP42768 502 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 PGFP49763 221 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 GOLGA8FQ08AF8 430 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 GOLGA8DPQ0D2H9 430 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 SLC14A1Q13336 389 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 SLC41A1Q8IVJ1 513 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 MINDY1Q8N5J2 469 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 DEFB119Q8N690 84 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 SLC2A14Q8TDB8 520 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 ACOX2Q99424 681 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 BBS2Q9BXC9 721 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 SLC39A2Q9NP94 309 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 FSCN3Q9NQT6 498 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 LSM7Q9UK45 103 aaKnown RBP19.73■□□□□ 0.75
NME3-204ENST00000563498 KLK13Q9UKR3 277 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 GON4LQ3T8J9 2241 aa19.73■□□□□ 0.75
NME3-204ENST00000563498 NEDD8-MDP1E9PL57 170 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 GFRA2O00451 464 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 BEST1O76090 585 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 CLSTN1O94985 981 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 VNN1O95497 513 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 RPN1P04843 607 aaKnown RBP19.72■□□□□ 0.75
NME3-204ENST00000563498 CCDC130P13994 396 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 ATP5C1P36542 298 aaKnown RBP19.72■□□□□ 0.75
NME3-204ENST00000563498 ZNF423Q2M1K9 1284 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 SGSM1Q2NKQ1 1148 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 KLHDC10Q6PID8 442 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 SCARA5Q6ZMJ2 495 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 PKD1L2Q7Z442 2459 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 UNC93AQ86WB7 457 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 TRIML1Q8N9V2 468 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 TAF4BQ92750 862 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 ZNF419Q96HQ0 510 aaPredicted RBP19.72■□□□□ 0.75
NME3-204ENST00000563498 HSPA12BQ96MM6 686 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 FAM124BQ9H5Z6 455 aaPredicted RBP19.72■□□□□ 0.75
NME3-204ENST00000563498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.72■□□□□ 0.75
NME3-204ENST00000563498 CYP8B1Q9UNU6 501 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 SCML2Q9UQR0 700 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 WDFY3Q8IZQ1 3526 aa19.72■□□□□ 0.75
NME3-204ENST00000563498 CACNA1EQ15878 2313 aa19.71■□□□□ 0.75
NME3-204ENST00000563498 ADAMTS9Q9P2N4 1935 aa19.71■□□□□ 0.75
NME3-204ENST00000563498 PRRT4C9JH25 899 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms