RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 FAM200BP0CF97 657 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 ADORA2BP29275 332 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 PMLP29590 882 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 SYKP43405 635 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 NDUFA8P51970 172 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 PPP3CAQ08209 521 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 DPYDQ12882 1025 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 HTR3DQ70Z44 454 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 FRMD1Q8N878 549 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 TAS1R2Q8TE23 839 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 POLMQ9NP87 494 aaPredicted RBP22.14■■□□□ 1.13
CHD9-208ENST00000563410 CYLDQ9NQC7 956 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 TBC1D3BA6NDS4 549 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 PATE3B3GLJ2 98 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 TRIM49P0CI25 452 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 TRIM49CP0CI26 452 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 NR2F2P24468 414 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 GCLMP48507 274 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 ANO4Q32M45 955 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 BTBD8Q5XKL5 378 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 CYP2U1Q7Z449 544 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 TERB1Q8NA31 727 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 WHAMMQ8TF30 809 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 NACA2Q9H009 215 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 DEC1Q9P2X7 70 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 MBD1Q9UIS9 605 aaPredicted RBP22.13■■□□□ 1.13
CHD9-208ENST00000563410 MAPK8IP1Q9UQF2 711 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 SCML2Q9UQR0 700 aa22.13■■□□□ 1.13
CHD9-208ENST00000563410 ADAMTS9Q9P2N4 1935 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 C4orf47A7E2U8 309 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 CYP26A1O43174 497 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 KRT37O76014 449 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 KIF20AO95235 890 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 DHPSP49366 369 aaPredicted RBP22.12■■□□□ 1.13
CHD9-208ENST00000563410 KRT85P78386 507 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 INTS8Q75QN2 995 aaKnown RBP22.12■■□□□ 1.13
CHD9-208ENST00000563410 ZNF513Q8N8E2 541 aaPredicted RBP22.12■■□□□ 1.13
CHD9-208ENST00000563410 HMGB4Q8WW32 186 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 CYFIP2Q96F07 1278 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 NT5C1AQ9BXI3 368 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 CYP3A43Q9HB55 503 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 NMUR1Q9HB89 426 aa22.12■■□□□ 1.13
CHD9-208ENST00000563410 TCRBV21S2A2A0A5A6 115 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 KHNYNO15037 678 aaKnown RBP22.11■■□□□ 1.13
CHD9-208ENST00000563410 CILPO75339 1184 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 ACO1P21399 889 aaKnown RBP22.11■■□□□ 1.13
CHD9-208ENST00000563410 ATP5C1P36542 298 aaKnown RBP22.11■■□□□ 1.13
CHD9-208ENST00000563410 MCCD1P59942 119 aaPredicted RBP22.11■■□□□ 1.13
CHD9-208ENST00000563410 MAP7D1Q3KQU3 841 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 C10orf76Q5T2E6 689 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 MIB1Q86YT6 1006 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 GUF1Q8N442 669 aaKnown RBP22.11■■□□□ 1.13
CHD9-208ENST00000563410 KCNV2Q8TDN2 545 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 JAKMIP2Q96AA8 810 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 IMPG2Q9BZV3 1241 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 NIF3L1Q9GZT8 377 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 PNPLA8Q9NP80 782 aa22.11■■□□□ 1.13
CHD9-208ENST00000563410 BCCIPQ9P287 314 aaKnown RBP eCLIP22.11■■□□□ 1.13
CHD9-208ENST00000563410 PCNX2A6NKB5 2137 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 CDX4O14627 284 aaPredicted RBP22.1■■□□□ 1.13
CHD9-208ENST00000563410 IRX4P78413 519 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 ENPEPQ07075 957 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 PREPLQ4J6C6 727 aaPredicted RBP22.1■■□□□ 1.13
CHD9-208ENST00000563410 ZCWPW2Q504Y3 356 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 KRBA2Q6ZNG9 492 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 FAM186BQ8IYM0 893 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 TMEFF1Q8IYR6 380 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 PIGKQ92643 395 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 GOLPH3LQ9H4A5 285 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.1■■□□□ 1.13
CHD9-208ENST00000563410 MARK1Q9P0L2 795 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 NUDT5Q9UKK9 219 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 ANGPTL2Q9UKU9 493 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 CIZ1Q9ULV3 898 aaPredicted RBP22.1■■□□□ 1.13
CHD9-208ENST00000563410 STARD13Q9Y3M8 1113 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 PCDHA5Q9Y5H7 936 aa22.1■■□□□ 1.13
CHD9-208ENST00000563410 A0A1W2PQH9 124 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 NEDD8-MDP1E9PL57 170 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 MDM4O15151 490 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 CACNG3O60359 315 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 RARGP13631 454 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 CD58P19256 250 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 PTGER3P43115 390 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 KIF11P52732 1056 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 ADAM9Q13443 819 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 PSAPL1Q6NUJ1 521 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 KLHDC10Q6PID8 442 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 LPCAT2Q7L5N7 544 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 TRMT11Q7Z4G4 463 aaKnown RBP22.09■■□□□ 1.13
CHD9-208ENST00000563410 CCDC47Q96A33 483 aaKnown RBP22.09■■□□□ 1.13
CHD9-208ENST00000563410 SPACA7Q96KW9 195 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 MMRN2Q9H8L6 949 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 TMEM8AQ9HCN3 771 aa22.09■■□□□ 1.13
CHD9-208ENST00000563410 KRT13P13646 458 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 TYRP14679 529 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 GABRG2P18507 467 aa22.08■■□□□ 1.13
CHD9-208ENST00000563410 TRIM21P19474 475 aaKnown RBP22.08■■□□□ 1.13
CHD9-208ENST00000563410 PSMC2P35998 433 aaKnown RBP22.08■■□□□ 1.13
CHD9-208ENST00000563410 SHC2P98077 582 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms