RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 GREM1O60565 184 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 JAK2O60674 1132 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 CISD3P0C7P0 127 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 C6P13671 934 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 JUPP14923 745 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 BDNFP23560 247 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 POLR2BP30876 1174 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 GRIK1P39086 918 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 PNPLA4P41247 253 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 IL12RB1P42701 662 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 PPP3CCP48454 512 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 CSNK1EP49674 416 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 TPMTP51580 245 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 FOXK1P85037 733 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 POU5F1Q01860 360 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 RHDQ02161 417 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 ST3GAL1Q11201 340 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 TAF10Q12962 218 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 ENPP2Q13822 863 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 LY6DQ14210 128 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 SF3A1Q15459 793 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 SOWAHAQ2M3V2 549 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 PREPLQ4J6C6 727 aaPredicted RBP8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 CCDC157Q569K6 752 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 KCNT1Q5JUK3 1230 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 TTC38Q5R3I4 469 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 BTBD8Q5XKL5 378 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 FBXL19Q6PCT2 694 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 VSTM1Q6UX27 236 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 TMEM86AQ8N2M4 240 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 NECAB1Q8N987 351 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 KBTBD7Q8WVZ9 684 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 FGF11Q92914 225 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 GTF3C6Q969F1 213 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 IGSF8Q969P0 613 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 MYLPFQ96A32 169 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 P2RY11Q96G91 374 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 TMEM176AQ96HP8 235 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 OSGEPQ9NPF4 335 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 ANKRD6Q9Y2G4 727 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 NME7Q9Y5B8 376 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 STYXL1Q9Y6J8 313 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 AK5Q9Y6K8 562 aa8.23□□□□□ -1.09
HERPUD1-206ENST00000563343 ENC1O14682 589 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 ZBTB24O43167 697 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 COCHO43405 550 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 HUS1O60921 280 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 ITGB3P05106 788 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 MBL2P11226 248 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 LMO2P25791 158 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 PCSK1P29120 753 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 HNF1BP35680 557 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 CTSKP43235 329 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 LHX1P48742 406 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 ACADVLP49748 655 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 CCT8P50990 548 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 AFF3P51826 1226 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 ZNF131P52739 623 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 COPAP53621 1224 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 CACNA2D1P54289 1103 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 PSMC1P62191 440 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 GUCY1B3Q02153 619 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 CCDC173Q0VFZ6 552 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 KCNH2Q12809 1159 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 ME3Q16798 604 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 TBC1D25Q3MII6 688 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 TAF1BQ53T94 588 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 COLEC12Q5KU26 742 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 HES3Q5TGS1 186 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 GRAMD4Q6IC98 578 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 SDE2Q6IQ49 451 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 LAYNQ6UX15 382 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 C4orf50Q6ZRC1 276 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 USP49Q70CQ1 688 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 NT5DC4Q86YG4 428 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 ADGRF2Q8IZF7 708 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 TOP6BLQ8N6T0 577 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 LRRC52Q8N7C0 313 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 SNRNP27Q8WVK2 155 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 TSC1Q92574 1164 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 PCED1BQ96HM7 432 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 FAM84AQ96KN4 292 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 ORAI3Q9BRQ5 295 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 IKZF4Q9H2S9 585 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 TM9SF3Q9HD45 589 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 DNAJC17Q9NVM6 304 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 KCND2Q9NZV8 630 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 MARK1Q9P0L2 795 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 LARSQ9P2J5 1176 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 MAGEC2Q9UBF1 373 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 FTSJ1Q9UET6 329 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 AGAP1Q9UPQ3 857 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 PCDHB6Q9Y5E3 794 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 STON1Q9Y6Q2 735 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 UTP20O75691 2785 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 DOCK9Q9BZ29 2069 aa8.22□□□□□ -1.09
HERPUD1-206ENST00000563343 A0A1B0GTQ1 180 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 F8VP50 259 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 SLC28A2O43868 658 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 RFPL3O75679 317 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms