RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HGFP14210 728 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 EGR1P18146 543 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 ATICP31939 592 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 MAPK9P45984 424 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 CLCN2P51788 898 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 PGDP52209 483 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 LMOD3Q0VAK6 560 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 FOXF2Q12947 444 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 CLCA4Q14CN2 919 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 PDCD2Q16342 344 aaPredicted RBP3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 MAPKAPK3Q16644 382 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 LY6KQ17RY6 165 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 SLC5A9Q2M3M2 681 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 TMEM95Q3KNT9 176 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 FAXCQ5TGI0 409 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 SLC9A4Q6AI14 798 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 WDR53Q7Z5U6 358 aaPredicted RBP3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 PEG10Q86TG7 708 aaKnown RBP3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 ATG16L2Q8NAA4 619 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 MBD3L2Q8NHZ7 208 aaPredicted RBP3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 RP9Q8TA86 221 aaKnown RBP3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 TRIM63Q969Q1 353 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 KLK15Q9H2R5 256 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 TMEM8AQ9HCN3 771 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 LRFN1Q9P244 771 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 RIMKLBQ9ULI2 386 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 USP22Q9UPT9 525 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 DRG1Q9Y295 367 aaKnown RBP3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 COL15A1P39059 1388 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 GOLGA6L3A6NEY3 463 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 GCOM1H8Y6P7 765 aaPredicted RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 AGPSO00116 658 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 PODXLO00592 558 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 COQ9O75208 318 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 PRKCBP05771 671 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 FESP07332 822 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 ELFN1P0C7U0 828 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 JUPP14923 745 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 MST1P26927 711 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 RBL1P28749 1068 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 ALDH9A1P49189 494 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 GATMP50440 423 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 KRTAP10-11P60412 298 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 FHL3Q13643 280 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 PUM3Q15397 648 aaKnown RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 RAB30Q15771 203 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 SLC4A8Q2Y0W8 1093 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 ARL6IP4Q66PJ3 421 aaKnown RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 RAP1GAP2Q684P5 730 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 ANKRD16Q6P6B7 361 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 MTHFD1LQ6UB35 978 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 USP49Q70CQ1 688 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 CAND1Q86VP6 1230 aaKnown RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 RAB11FIP4Q86YS3 637 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 CCDC28AQ8IWP9 274 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 SRRM1Q8IYB3 904 aaKnown RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 NKAPQ8N5F7 415 aaKnown RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 ZNF527Q8NB42 609 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 MUL1Q969V5 352 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 R3HDM4Q96D70 268 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 ZBTB45Q96K62 511 aaPredicted RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 HIST1H2AAQ96QV6 131 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 TIMP4Q99727 224 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 EIF2AK1Q9BQI3 630 aaKnown RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 UBA5Q9GZZ9 404 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 PCDHAC1Q9H158 963 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 SLC25A32Q9H2D1 315 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 ARHGEF3Q9NR81 526 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 SAGE1Q9NXZ1 904 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 C9orf78Q9NZ63 289 aaPredicted RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 TMOD4Q9NZQ9 345 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 GRHPRQ9UBQ7 328 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 SLC39A10Q9ULF5 831 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 ZMYND8Q9ULU4 1186 aaPredicted RBP3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 CA14Q9ULX7 337 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 DGKBQ9Y6T7 804 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 FER1L4A9Z1Z3 1794 aa3.81□□□□□ -1.8
SHCBP1-202ENST00000563219 LINC00473A8K010 186 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 TRIM38O00635 465 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 FFAR2O15552 330 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 SNX2O60749 519 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 VNN1O95497 513 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 AGR2O95994 175 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 DLDP09622 509 aaKnown RBP3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 CD19P15391 556 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 PDIA3P30101 505 aaKnown RBP3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 GKP32189 559 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 HTR7P34969 479 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 MTHFSP49914 203 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 TPTEP56180 551 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 ICA1Q05084 483 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 ATP1A4Q13733 1029 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 BLMHQ13867 455 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 TAF5Q15542 800 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 CYP1B1Q16678 543 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 ABLIM2Q6H8Q1 611 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 PGBD2Q6P3X8 592 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 FBXO38Q6PIJ6 1188 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms