RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 TSG101Q99816 390 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 KLF16Q9BXK1 252 aaPredicted RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 DUSP16Q9BY84 665 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 UBXN6Q9BZV1 441 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 DUSP15Q9H1R2 295 aaPredicted RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 MMRN2Q9H8L6 949 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 VPS45Q9NRW7 570 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 DEC1Q9P2X7 70 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 HOOK1Q9UJC3 728 aaKnown RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 LSM7Q9UK45 103 aaKnown RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 USP3Q9Y6I4 520 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 SCAMP3O14828 347 aaKnown RBP13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 GREM1O60565 184 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 TULP3O75386 442 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 SMC2O95347 1197 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 CD58P19256 250 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 MPLP40238 635 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 PRCPP42785 496 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 PLA2G4AP47712 749 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 PGFP49763 221 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 FKBP3Q00688 224 aaKnown RBP13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 PPP1R26Q5T8A7 1209 aaPredicted RBP13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 GPRIN1Q7Z2K8 1008 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 TRMT11Q7Z4G4 463 aaKnown RBP13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 ELOA2Q8IYF1 753 aaPredicted RBP13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 SMYD4Q8IYR2 804 aaPredicted RBP13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 POLMQ9NP87 494 aaPredicted RBP13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 CISHQ9NSE2 258 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 CLIC5Q9NZA1 410 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 MARK1Q9P0L2 795 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 DNMT3LQ9UJW3 386 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 COQ4Q9Y3A0 265 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 STARD13Q9Y3M8 1113 aa13.81□□□□□ -0.2
AC009055.1-201ENST00000562656 DCDC2BA2VCK2 349 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 TBC1D3BA6NDS4 549 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 CYP26A1O43174 497 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 GDF9O60383 454 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 KLF8O95600 359 aaPredicted RBP13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 RARGP13631 454 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 TIE1P35590 1138 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 LRRC63Q05C16 580 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 MESP2Q0VG99 397 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 AASDHQ4L235 1098 aaPredicted RBP13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 ARHGAP17Q68EM7 881 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 ANO7Q6IWH7 933 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 TMEM92Q6UXU6 159 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 TMEM25Q86YD3 366 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 CCDC33Q8N5R6 958 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 ALLCQ8N6M5 410 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 TERB1Q8NA31 727 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 TXNDC5Q8NBS9 432 aaKnown RBP13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 OLIG1Q8TAK6 271 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 TMEM176AQ96HP8 235 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 HEXIM2Q96MH2 286 aaKnown RBP13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 XPO6Q96QU8 1125 aaKnown RBP13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 NMUR1Q9HB89 426 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 WDR35Q9P2L0 1181 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 SDK1Q7Z5N4 2213 aa13.8□□□□□ -0.2
AC009055.1-201ENST00000562656 A0A1W2PQH9 124 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 BCLAF3A2AJT9 711 aaKnown RBP13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 SGK1O00141 431 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 CACNG3O60359 315 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 TBX18O95935 607 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 IRF1P10914 325 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 RALAP11233 206 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 GBP1P32455 592 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 PPP1R2P41236 205 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 RAD23BP54727 409 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 SLC8A3P57103 927 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 KDSRQ06136 332 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 BYSLQ13895 437 aaKnown RBP13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 SF3A2Q15428 464 aaKnown RBP13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 ANO4Q32M45 955 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 ZNF394Q53GI3 561 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 RAB41Q5JT25 222 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 PMS2CLQ68D20 193 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 ANKRD40Q6AI12 368 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 NAT16Q8N8M0 369 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 ANKRD52Q8NB46 1076 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 SLC4A11Q8NBS3 891 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 MDGA1Q8NFP4 955 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 SMARCE1Q969G3 411 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 WBP2Q969T9 261 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 JAKMIP2Q96AA8 810 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 EEF2KMTQ96G04 330 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 ZNF510Q9Y2H8 683 aa13.79□□□□□ -0.2
AC009055.1-201ENST00000562656 MYO18AQ92614 2054 aaKnown RBP13.78□□□□□ -0.2
AC009055.1-201ENST00000562656 ANTXRLA6NF34 631 aa13.78□□□□□ -0.2
AC009055.1-201ENST00000562656 DCLK1O15075 740 aa13.78□□□□□ -0.2
AC009055.1-201ENST00000562656 ADAM23O75077 832 aa13.78□□□□□ -0.2
AC009055.1-201ENST00000562656 HNRNPLP14866 589 aaKnown RBP eCLIP13.78□□□□□ -0.2
AC009055.1-201ENST00000562656 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
AC009055.1-201ENST00000562656 COG7P83436 770 aa13.78□□□□□ -0.2
AC009055.1-201ENST00000562656 STIM1Q13586 685 aa13.78□□□□□ -0.2
AC009055.1-201ENST00000562656 CBWD6Q4V339 395 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms