RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ZMYND8Q9ULU4 1186 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 SCML2Q9UQR0 700 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 ZNF638Q14966 1978 aaKnown RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 hCG_1818297A0A087WSY0 165 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 WDR27A2RRH5 827 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 TLL1O43897 1013 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 FGF18O76093 207 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 TJP3O95049 919 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 F9P00740 461 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 RARAP10276 462 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 RALAP11233 206 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 OR1D2P34982 312 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 CDKN2BP42772 138 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 CDR1P51861 262 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 RABGGTBP53611 331 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 TAZQ16635 292 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 MGAT5BQ3V5L5 792 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 RASIP1Q5U651 963 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 TXNRD3NBQ6F5E7 133 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 HFE2Q6ZVN8 426 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 VPS52Q8N1B4 723 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 KCTD6Q8NC69 237 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 CCDC26Q8TAB7 109 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 NDRG1Q92597 394 aaKnown RBP14.9□□□□□ -0.02
COMMD4-205ENST00000562310 RNF25Q96BH1 459 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-205ENST00000562310 PEBP4Q96S96 227 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 KRT12Q99456 494 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 SEPT5Q99719 369 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-205ENST00000562310 MRPL17Q9NRX2 175 aaKnown RBP14.9□□□□□ -0.02
COMMD4-205ENST00000562310 ABCC13Q9NSE7 274 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.9□□□□□ -0.02
COMMD4-205ENST00000562310 KLHL11Q9NVR0 708 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 IL37Q9NZH6 218 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 PLXNA4Q9HCM2 1894 aa14.9□□□□□ -0.02
COMMD4-205ENST00000562310 FAM92AA1XBS5 289 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 VNN2O95498 520 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 FYNP06241 537 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 RHOXF2BP0C7M4 288 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 LINC00271P0C7V0 271 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 NCAM1P13591 858 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 KDELR1P24390 212 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 FNTAP49354 379 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 PSEN1P49768 467 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 YWHAGP61981 247 aaKnown RBP eCLIP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 DEUP1Q05D60 604 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 KLF1Q13351 362 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 RAB33AQ14088 237 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 DHX34Q14147 1143 aaKnown RBP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 KRT81Q14533 505 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 NAA30Q147X3 362 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 DDR2Q16832 855 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 SMTNL2Q2TAL5 461 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 SH3PXD2AQ5TCZ1 1133 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 PRPF38BQ5VTL8 546 aaKnown RBP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 BSPRYQ5W0U4 402 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 BTBD8Q5XKL5 378 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 SCYL2Q6P3W7 929 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 MFSD7Q6UXD7 560 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 DENND5BQ6ZUT9 1274 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 CYP4V2Q6ZWL3 525 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 SND1Q7KZF4 910 aaKnown RBP eCLIP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 MAATS1Q7Z4T9 603 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 MON1AQ86VX9 555 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 KLHL7Q8IXQ5 586 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 SCAMP5Q8TAC9 235 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 ZNF461Q8TAF7 563 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 RAPGEF5Q92565 580 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 HSPH1Q92598 858 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 CLSTN3Q9BQT9 956 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 RHOXF2Q9BQY4 288 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 SNRNP25Q9BV90 132 aaKnown RBP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 FRMD8P1Q9BZ68 369 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 ZBP1Q9H171 429 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 FAM204AQ9H8W3 233 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 ANKZF1Q9H8Y5 726 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 ARGLU1Q9NWB6 273 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-205ENST00000562310 LZTS1Q9Y250 596 aa14.89□□□□□ -0.03
COMMD4-205ENST00000562310 C3orf70A6NLC5 250 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-205ENST00000562310 PI4K2BG5E9Z4 385 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 M0QYT0 321 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 C2CD2LO14523 706 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 ADAM12O43184 909 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 ABLIM3O94929 683 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 CTSAP10619 480 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 YWHAQP27348 245 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 GBP1P32455 592 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 CDH6P55285 790 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 TFDP2Q14188 446 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 SIX1Q15475 284 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-205ENST00000562310 ATP13A4Q4VNC1 1196 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 KCNT1Q5JUK3 1230 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 ERMARDQ5T6L9 678 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 OTUD1Q5VV17 481 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-205ENST00000562310 WDR93Q6P2C0 686 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 TTC9BQ8N6N2 239 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 PRELID2Q8N945 189 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 TTC13Q8NBP0 860 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 SLC7A14Q8TBB6 771 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 FAM71BQ8TC56 605 aa14.88□□□□□ -0.03
COMMD4-205ENST00000562310 ANKRD7Q92527 254 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms