RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 AMHP03971 560 aa11.58□□□□□ -0.55
RPAP1-204ENST00000562303 CLTBP09497 229 aa11.58□□□□□ -0.55
RPAP1-204ENST00000562303 IGFBP4P22692 258 aa11.58□□□□□ -0.55
RPAP1-204ENST00000562303 PTPN3P26045 913 aa11.58□□□□□ -0.55
RPAP1-204ENST00000562303 SERPINB3P29508 390 aa11.58□□□□□ -0.55
RPAP1-204ENST00000562303 ITGA9Q13797 1035 aa11.58□□□□□ -0.55
RPAP1-204ENST00000562303 C2CD6Q53TS8 623 aa11.58□□□□□ -0.55
RPAP1-204ENST00000562303 CDK20Q8IZL9 346 aa11.58□□□□□ -0.55
RPAP1-204ENST00000562303 POMGNT2Q8NAT1 580 aa11.58□□□□□ -0.55
RPAP1-204ENST00000562303 FDXACB1Q9BRP7 624 aaPredicted RBP11.58□□□□□ -0.55
RPAP1-204ENST00000562303 RPRD1BQ9NQG5 326 aaKnown RBP11.58□□□□□ -0.55
RPAP1-204ENST00000562303 DDX43Q9NXZ2 648 aaKnown RBP11.58□□□□□ -0.55
RPAP1-204ENST00000562303 SLC37A4O43826 429 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 GYS1P13807 737 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 FEN1P39748 380 aaKnown RBP11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ITPK1Q13572 414 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 PREPLQ4J6C6 727 aaPredicted RBP11.58□□□□□ -0.56
RPAP1-204ENST00000562303 PTAR1Q7Z6K3 402 aaPredicted RBP11.58□□□□□ -0.56
RPAP1-204ENST00000562303 KIF2BQ8N4N8 673 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 EXD1Q8NHP7 514 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ACOX2Q99424 681 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 MTG1Q9BT17 334 aaPredicted RBP11.58□□□□□ -0.56
RPAP1-204ENST00000562303 MRPS26Q9BYN8 205 aaKnown RBP11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ACTR8Q9H981 624 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 SETD4Q9NVD3 440 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 KLHL28Q9NXS3 571 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 SHROOM2Q13796 1616 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ITGB6P18564 788 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 NPTX2P47972 431 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 RENBPP51606 427 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 CCNG1P51959 295 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 TRAF7Q6Q0C0 670 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ILDR2Q71H61 639 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 COMMD2Q86X83 199 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ELOA2Q8IYF1 753 aaPredicted RBP11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ANKS1AQ92625 1134 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 SYN2Q92777 582 aaPredicted RBP11.58□□□□□ -0.56
RPAP1-204ENST00000562303 KCNB2Q92953 911 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ZSWIM1Q9BR11 485 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 RAD54BQ9Y620 910 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 BMP10O95393 424 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 RANBP1P43487 201 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 CASP4P49662 377 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 SLC29A2Q14542 456 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 RETSATQ6NUM9 610 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 USP49Q70CQ1 688 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 STRA8Q7Z7C7 330 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 PRRG3Q9BZD7 231 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ISCUQ9H1K1 167 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 RRAGCQ9HB90 399 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 GPAMQ9HCL2 828 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 AHSPQ9NZD4 102 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 TIMM13Q9Y5L4 95 aaPredicted RBP11.58□□□□□ -0.56
RPAP1-204ENST00000562303 NUDT14O95848 222 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ARP10275 920 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 PPP2R1BP30154 601 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 OVGP1Q12889 678 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 MMRN1Q13201 1228 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ACOX1Q15067 660 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 NCF4Q15080 339 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 LRRC6Q86X45 466 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 ZNF786Q8N393 782 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 TBC1D13Q9NVG8 400 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 GPRC5DQ9NZD1 345 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 SEPT3Q9UH03 358 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 VPS51Q9UID3 782 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 KLHL20Q9Y2M5 609 aa11.58□□□□□ -0.56
RPAP1-204ENST00000562303 CCNT2O60583 730 aaKnown RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 XYLBO75191 536 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 RBP1P09455 135 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CYP2A7P20853 494 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 SERPINB1P30740 379 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 BST2Q10589 180 aaKnown RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CSHL1Q14406 222 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 TFDP3Q5H9I0 405 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 OVOS1Q6IE37 1185 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 SUGP1Q8IWZ8 645 aaKnown RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 C3orf20Q8ND61 904 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 TMEM159Q96B96 161 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 PPP1R10Q96QC0 940 aaKnown RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 MBD5Q9P267 1494 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 NR5A2O00482 541 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 DSG3P32926 999 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 RAB27AP51159 221 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 PPM1LQ5SGD2 360 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CACUL1Q86Y37 369 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CLYBLQ8N0X4 340 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 TMEM176AQ96HP8 235 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 POLR1DQ9Y2S0 133 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 ABCA8O94911 1581 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 PDHXO00330 501 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 FOXN3O00409 490 aaPredicted RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 ENO2P09104 434 aaPredicted RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 UBTFL6P0CB48 400 aaPredicted RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 ATP6V1B2P21281 511 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 SLC26A2P50443 739 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 KLC1Q07866 573 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CYLC2Q14093 348 aaPredicted RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CBWD3Q5JTY5 395 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CBWD5Q5RIA9 395 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms