RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 ZNF682O95780 498 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PKNOX1P55347 436 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PRKCQQ04759 706 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 WASHC5Q12768 1159 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 DCTN2Q13561 401 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PTRHD1Q6GMV3 140 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 BBS7Q8IWZ6 715 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 EMC1Q8N766 993 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 DCUN1D1Q96GG9 259 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 APOPT1Q96IL0 206 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 MXRA8Q9BRK3 442 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 INTS13Q9NVM9 706 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 UBAP1Q9NZ09 502 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 CLIC5Q9NZA1 410 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 CROCC2H7BZ55 1655 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PRRG1O14668 218 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 AHCYL1O43865 530 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 EFCAB14O75071 495 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 RAP1GAPP47736 663 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 MRPS22P82650 360 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 KRR1Q13601 381 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 CLEC16AQ2KHT3 1053 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 DEFB128Q7Z7B8 93 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 UNC45BQ8IWX7 931 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 EXD1Q8NHP7 514 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 CDRT15Q96T59 188 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 DUSP9Q99956 384 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 CLOCKO15516 846 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 ITGB3P05106 788 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 CSF1RP07333 972 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 SYTL3Q4VX76 610 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 NT5DC1Q5TFE4 455 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 ATF7IP2Q5U623 682 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 KCNH7Q9NS40 1196 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 RNF112Q9ULX5 631 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 SLC30A1Q9Y6M5 507 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 IGSF9BQ9UPX0 1349 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 H0YC42 278 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 LGR5O75473 907 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 POU1F1P28069 291 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 MTMR2Q13614 643 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 NTRK3Q16288 839 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 CYP51A1Q16850 503 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 PODNQ7Z5L7 613 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 SPATA2LQ8IUW3 424 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 MAML3Q96JK9 1138 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 GBA2Q9HCG7 927 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 AAASQ9NRG9 546 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 A2ML1A8K2U0 1454 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 DCXO43602 365 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 GSNP06396 782 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 DRD4P21917 467 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 AKT1P31749 480 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 GSSP48637 474 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 PNMA5Q96PV4 448 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 LRRC4BQ9NT99 713 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 CACNA2D2Q9NY47 1150 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 ABCA6Q8N139 1617 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 UNC5CO95185 931 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 NCAM1P13591 858 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 FASP25445 335 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 CHN2P52757 468 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 FAAP100Q0VG06 881 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 CSHL1Q14406 222 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 TAF2Q6P1X5 1199 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 CCDC149Q6ZUS6 474 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 GLT1D1Q96MS3 346 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 TBC1D10AQ9BXI6 508 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 PACSIN3Q9UKS6 424 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 SESN1Q9Y6P5 492 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 C2CD2LO14523 706 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 UBDO15205 165 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 ALOX12P18054 663 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 QPCTQ16769 361 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 ARMC4Q5T2S8 1044 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 ERMARDQ5T6L9 678 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 SNX32Q86XE0 403 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 EFCAB3Q8N7B9 438 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 TAS1R2Q8TE23 839 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 ZFYVE1Q9HBF4 777 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 SAR1AQ9NR31 198 aa10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 ZMYND8Q9ULU4 1186 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-202ENST00000561623 FAM20BO75063 409 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 EGFRP00533 1210 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 GZMAP12544 262 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 SLC16A1P53985 500 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 PKN1Q16512 942 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ATP6AP1LQ52LC2 224 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 BOLA3Q53S33 107 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ARHGEF19Q8IW93 802 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 ACTL9Q8TC94 416 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 CKAP2Q8WWK9 683 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 HPDLQ96IR7 371 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 FAR2Q96K12 515 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 CEP41Q9BYV8 373 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 GGA3Q9NZ52 723 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 RCCD1A6NED2 376 aa10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 TRIM28Q13263 835 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-202ENST00000561623 XRCC4Q13426 336 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms