RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 FAM98BQ52LJ0 330 aaKnown RBP13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 ZFP1Q6P2D0 407 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 MPZL3Q6UWV2 235 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 GPRC5AQ8NFJ5 357 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 UCMAQ8WVF2 138 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 ACSF2Q96CM8 615 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 TBCBQ99426 244 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 MMADHCQ9H3L0 296 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 COPS7BQ9H9Q2 264 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 TCF7L2Q9NQB0 619 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 STARD13Q9Y3M8 1113 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 CENPXA8MT69 81 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 CES2O00748 559 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 DARSP14868 501 aaKnown RBP13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 CPT1AP50416 773 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 MAD2L1Q13257 205 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 AGKQ53H12 422 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 CYP4Z2PQ8N1L4 340 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 RNFT2Q96EX2 444 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 NSMCE2Q96MF7 247 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 KLHL28Q9NXS3 571 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 LNPEPQ9UIQ6 1025 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 USP18Q9UMW8 372 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 AP4E1Q9UPM8 1137 aa13.59□□□□□ -0.23
CSPG4P11-201ENST00000560634 MAP3K4Q9Y6R4 1608 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 E9PBE3 544 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 MED26O95402 600 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 GLP2RO95838 553 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 BCL10O95999 233 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 SERPINE1P05121 402 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 ICAM1P05362 532 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 PIK3R1P27986 724 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 POU1F1P28069 291 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 GRK3P35626 688 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 RXRGP48443 463 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 RPS7P62081 194 aaKnown RBP13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 TMEM62Q0P6H9 643 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 TBCELQ5QJ74 424 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 TDRD5Q8NAT2 981 aaKnown RBP13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 ELOVL6Q9H5J4 265 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 NAALADL1Q9UQQ1 740 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 DYRK1BQ9Y463 629 aa13.58□□□□□ -0.23
CSPG4P11-201ENST00000560634 PNMA8CA0A1B0GUJ8 204 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 F8VZ95 297 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 H7C4K7 107 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 NR5A2O00482 541 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZNF862O60290 1169 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 TCF7P36402 384 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 OXCT1P55809 520 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 SLC34A1Q06495 639 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 CCDC153Q494R4 210 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ARMC4Q5T2S8 1044 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 CDKAL1Q5VV42 579 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZCCHC7Q8N3Z6 543 aaKnown RBP13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 C10orf53Q8N6V4 93 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZFRQ96KR1 1074 aaKnown RBP13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 SENP2Q9HC62 589 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ABI2Q9NYB9 513 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 DUSP10Q9Y6W6 482 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 KLHL41O60662 606 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 AVPR1AP37288 418 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 SKIV2L2P42285 1042 aaKnown RBP13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 PHKG1Q16816 387 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZNF284Q2VY69 593 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 C11orf96Q7Z7L8 435 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 SETD9Q8NE22 299 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ACTL9Q8TC94 416 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 TSEN34Q9BSV6 310 aaKnown RBP13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZNF682O95780 498 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 GLRBP48167 497 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 CACNA2D1P54289 1103 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 RPL10AP62906 217 aaKnown RBP13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 PRR5LQ6MZQ0 368 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 RINLQ6ZS11 566 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ERO1BQ86YB8 467 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 TRIM48Q8IWZ4 208 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 DEFB107AQ8IZN7 70 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 CATSPER2Q96P56 530 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 TRAPPC9Q96Q05 1148 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 TAAR1Q96RJ0 339 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 TMEM79Q9BSE2 394 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 HPS4Q9NQG7 708 aa13.58□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZBTB22O15209 634 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 DYRK3O43781 588 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 PLA2G6O60733 806 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 JCHAINP01591 159 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 CD44P16070 742 aaKnown RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 BGNP21810 368 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 TKTP29401 623 aaKnown RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 PPP2R1BP30154 601 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 GP5P40197 560 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 TGM3Q08188 693 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 VAC14Q08AM6 782 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 GIT2Q14161 759 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 KCNT1Q5JUK3 1230 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 LPCAT2Q7L5N7 544 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ADGRE3Q9BY15 652 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 PRKD2Q9BZL6 878 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms