RNA–Protein interactions for RNA: ENST00000560494.1

SLTM-222, Transcript of SAFB like transcription modulator, human

TSL 3

Gene SLTM, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-222	ENST00000560494	EIF3E	P60228	445 aa	Known RBP	13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	SKOR1	P84550	965 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	OTUD4	Q01804	1114 aa	Known RBP	13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	ADIG	Q0VDE8	80 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	DPYSL3	Q14195	570 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	TRADD	Q15628	312 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	NFE2	Q16621	373 aa	Predicted RBP	13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	SMTNL2	Q2TAL5	461 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	KRT71	Q3SY84	523 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	ATP13A4	Q4VNC1	1196 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	EFHC2	Q5JST6	749 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	RAB41	Q5JT25	222 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	DAB2IP	Q5VWQ8	1189 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	SLC9A4	Q6AI14	798 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	OVOS1	Q6IE37	1185 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	FAM171B	Q6P995	826 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	KDM7A	Q6ZMT4	941 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	CLEC20A	Q6ZU45	233 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	CENPU	Q71F23	418 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	TAOK1	Q7L7X3	1001 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	PPIL6	Q8IXY8	311 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	ACTL9	Q8TC94	416 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	PIK3R5	Q8WYR1	880 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	LPP	Q93052	612 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	NTAN1	Q96AB6	310 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	FAM149B1	Q96BN6	582 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	PGAP3	Q96FM1	320 aa	Predicted RBP	13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.4	□□□□□ -0.26	3e-6	■■■■■ 29.8
SLTM-222	ENST00000560494	SLC2A13	Q96QE2	648 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	KLHL11	Q9NVR0	708 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	PAK5	Q9P286	719 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	NME7	Q9Y5B8	376 aa		13.4	□□□□□ -0.26
SLTM-222	ENST00000560494	CASTOR2	A6NHX0	329 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494		H0YGN5	161 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	RIPK2	O43353	540 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	MGEA5	O60502	916 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	STK10	O94804	968 aa	Known RBP	13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	AGT	P01019	485 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	RBP3	P10745	1247 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	TCF4	P15884	667 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	ATP2A2	P16615	1042 aa	Known RBP	13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	PHB	P35232	272 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	VEGFB	P49765	207 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	SULT1E1	P49888	294 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	CDK7	P50613	346 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	TKTL1	P51854	596 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	HDAC4	P56524	1084 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	ATP11A	P98196	1134 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	YWHAH	Q04917	246 aa	Predicted RBP	13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	RNASEL	Q05823	741 aa	Known RBP	13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	ZNF844	Q08AG5	666 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	NR1H3	Q13133	447 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	MTA1	Q13330	715 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	UAP1	Q16222	522 aa	Predicted RBP	13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	CDO1	Q16878	200 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	P3H1	Q32P28	736 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	TIGD5	Q53EQ6	642 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	KCNT1	Q5JUK3	1230 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	ARHGAP18	Q8N392	663 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	NT5C3B	Q969T7	300 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	PCED1B	Q96HM7	432 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	SERPINB12	Q96P63	405 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	SNRNP25	Q9BV90	132 aa	Known RBP	13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	COLEC11	Q9BWP8	271 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	B3GNT5	Q9BYG0	378 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	PCDH18	Q9HCL0	1135 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	AP4E1	Q9UPM8	1137 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	NFS1	Q9Y697	457 aa		13.39	□□□□□ -0.27
SLTM-222	ENST00000560494	BCLAF3	A2AJT9	711 aa	Known RBP	13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	TULP2	O00295	520 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	NCAM2	O15394	837 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	TCEA3	O75764	348 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	TTC4	O95801	387 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	POMC	P01189	267 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	NR1D1	P20393	614 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	TKT	P29401	623 aa	Known RBP	13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	ARL4C	P56559	192 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	MAP3K7CL	P57077	242 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	DAOA	P59103	153 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	DSC1	Q08554	894 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	SCAP	Q12770	1279 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	GPS1	Q13098	491 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	CBLB	Q13191	982 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	STAT4	Q14765	748 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	ANKRD20A8P	Q5CZ79	823 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	TXNRD3NB	Q6F5E7	133 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	MFSD5	Q6N075	450 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	DARS2	Q6PI48	645 aa	Known RBP	13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	RTP4	Q96DX8	246 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	NPY6R	Q99463	290 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	TMEM175	Q9BSA9	504 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	HERPUD2	Q9BSE4	406 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	BRD8	Q9H0E9	1235 aa		13.38	□□□□□ -0.27
SLTM-222	ENST00000560494	CRTAC1	Q9NQ79	661 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms