RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 NUP58Q9BVL2 599 aa10.98□□□□□ -0.65
APH1B-208ENST00000560353 RUSC1Q9BVN2 902 aa10.98□□□□□ -0.65
APH1B-208ENST00000560353 CPNE5Q9HCH3 593 aa10.98□□□□□ -0.65
APH1B-208ENST00000560353 OSGEPQ9NPF4 335 aa10.98□□□□□ -0.65
APH1B-208ENST00000560353 DDX43Q9NXZ2 648 aaKnown RBP10.98□□□□□ -0.65
APH1B-208ENST00000560353 ORC3Q9UBD5 711 aaPredicted RBP10.98□□□□□ -0.65
APH1B-208ENST00000560353 CPSF3Q9UKF6 684 aaKnown RBP10.98□□□□□ -0.65
APH1B-208ENST00000560353 ANKRD6Q9Y2G4 727 aa10.98□□□□□ -0.65
APH1B-208ENST00000560353 RAD54BQ9Y620 910 aa10.98□□□□□ -0.65
APH1B-208ENST00000560353 CYP46A1Q9Y6A2 500 aa10.98□□□□□ -0.65
APH1B-208ENST00000560353 BOD1L1Q8NFC6 3051 aa10.98□□□□□ -0.65
APH1B-208ENST00000560353 COL5A1P20908 1838 aaPredicted RBP10.98□□□□□ -0.65
APH1B-208ENST00000560353 A0A0B4J269 797 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 HNRNPDLO14979 420 aaKnown RBP10.97□□□□□ -0.65
APH1B-208ENST00000560353 HUS1O60921 280 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 ABL1P00519 1130 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 ACAT1P24752 427 aaKnown RBP10.97□□□□□ -0.65
APH1B-208ENST00000560353 GUCY2CP25092 1073 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 TPMTP51580 245 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 ZNF132P52740 706 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 CLDN6P56747 220 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 FBXL19Q6PCT2 694 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 VSTM1Q6UX27 236 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 C4orf50Q6ZRC1 276 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 DENND5BQ6ZUT9 1274 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 DIS3L2Q8IYB7 885 aaKnown RBP10.97□□□□□ -0.65
APH1B-208ENST00000560353 CACTIN-AS1Q8N1I8 211 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 ZFRQ96KR1 1074 aaKnown RBP10.97□□□□□ -0.65
APH1B-208ENST00000560353 ZNF560Q96MR9 790 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 DUSP9Q99956 384 aaKnown RBP10.97□□□□□ -0.65
APH1B-208ENST00000560353 TTLL2Q9BWV7 592 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 SPHK2Q9NRA0 654 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 LRWD1Q9UFC0 647 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 HEMK1Q9Y5R4 338 aaPredicted RBP10.97□□□□□ -0.65
APH1B-208ENST00000560353 MYO18AQ92614 2054 aaKnown RBP10.97□□□□□ -0.65
APH1B-208ENST00000560353 CABIN1Q9Y6J0 2220 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 NOTCH2Q04721 2471 aa10.97□□□□□ -0.65
APH1B-208ENST00000560353 SPTAN1Q13813 2472 aaKnown RBP10.97□□□□□ -0.65
APH1B-208ENST00000560353 LRRK2Q5S007 2527 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 ANK1P16157 1881 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 KCNJ18B7U540 433 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 E9PMD0 336 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 H0Y8X5 98 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 LAD1O00515 517 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 KCNK3O14649 394 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 TRIM66O15016 1216 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 TRIM24O15164 1050 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 PAPSS1O43252 624 aaPredicted RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 CDC45O75419 566 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 LDOC1O95751 146 aaPredicted RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 OAS1P00973 400 aaKnown RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 IGLV3-19P01714 112 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 MBL2P11226 248 aaPredicted RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 SCP2P22307 547 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 PCSK1P29120 753 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 GRIK1P39086 918 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 GRIA4P48058 902 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 PCBP4P57723 403 aaKnown RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 USP46P62068 366 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 ORC1Q13415 861 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 ORC2Q13416 577 aaPredicted RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 FUT11Q495W5 492 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 ZNF574Q6ZN55 896 aaPredicted RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 TMEM25Q86YD3 366 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 SNRNP27Q8WVK2 155 aaKnown RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 CNDP2Q96KP4 475 aaKnown RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 FAM117AQ9C073 453 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 DNAJC17Q9NVM6 304 aaKnown RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 MAGEC2Q9UBF1 373 aaPredicted RBP10.96□□□□□ -0.65
APH1B-208ENST00000560353 SH3BP1Q9Y3L3 701 aa10.96□□□□□ -0.65
APH1B-208ENST00000560353 ANKRD17O75179 2603 aaKnown RBP10.96□□□□□ -0.66
APH1B-208ENST00000560353 KNL1Q8NG31 2342 aa10.96□□□□□ -0.66
APH1B-208ENST00000560353 WASH3PC4AMC7 463 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 PRRT4C9JH25 899 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 PIGRP01833 764 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 GP1BBP13224 206 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 ANXA13P27216 316 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 LHX1P48742 406 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 NOP14P78316 857 aaKnown RBP10.95□□□□□ -0.66
APH1B-208ENST00000560353 VAC14Q08AM6 782 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 ILKQ13418 452 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 FAM171BQ6P995 826 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 TMPRSS6Q8IU80 811 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 SNX29Q8TEQ0 813 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 SNX19Q92543 992 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 PRCCQ92733 491 aaPredicted RBP10.95□□□□□ -0.66
APH1B-208ENST00000560353 KCNN1Q92952 543 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 SIPA1Q96FS4 1042 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 NAF1Q96HR8 494 aaKnown RBP10.95□□□□□ -0.66
APH1B-208ENST00000560353 ZNF578Q96N58 590 aaPredicted RBP10.95□□□□□ -0.66
APH1B-208ENST00000560353 XPO6Q96QU8 1125 aaKnown RBP10.95□□□□□ -0.66
APH1B-208ENST00000560353 MKRN2Q9H000 416 aaKnown RBP10.95□□□□□ -0.66
APH1B-208ENST00000560353 TM9SF3Q9HD45 589 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 LARSQ9P2J5 1176 aaKnown RBP10.95□□□□□ -0.66
APH1B-208ENST00000560353 WDR35Q9P2L0 1181 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 ANKMY1Q9P2S6 941 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 L1RE1Q9UN81 338 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 STON1Q9Y6Q2 735 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 ANAPC1Q9H1A4 1944 aa10.95□□□□□ -0.66
APH1B-208ENST00000560353 NPC1O15118 1278 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms