RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 MYBL1P10243 752 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 UNGP13051 313 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 RARGP13631 454 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 GJA1P17302 382 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 MMP8P22894 467 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 RGS7P49802 495 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 CYP4F8P98187 520 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 AMPD2Q01433 879 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC6A3Q01959 620 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 FCHO2Q0JRZ9 810 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 NNTQ13423 1086 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 PTPN21Q16825 1174 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 CLEC16AQ2KHT3 1053 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 TDRD12Q587J7 1177 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 ACBD5Q5T8D3 534 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 TAF3Q5VWG9 929 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 BSPRYQ5W0U4 402 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC26A9Q7LBE3 791 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 RNF135Q8IUD6 432 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 SCUBE3Q8IX30 993 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 WDTC1Q8N5D0 677 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 BPIFB1Q8TDL5 484 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 CPLX3Q8WVH0 158 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 ANP32BQ92688 251 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 DNASE1L2Q92874 299 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 CPXM1Q96SM3 734 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 TRMT61BQ9BVS5 477 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 HAUS4Q9H6D7 363 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC2A4RGQ9NR83 387 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 HBS1LQ9Y450 684 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 PAXBP1Q9Y5B6 917 aa12.63□□□□□ -0.39
RABGGTA-215ENST00000560207 E2F8A0AVK6 867 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 GOLGA6L3A6NEY3 463 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 CHADO15335 359 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 COCHO43405 550 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 MFAP3LO75121 409 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 RTN2O75298 545 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC2A3P11169 496 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 MBL2P11226 248 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 SRFP11831 508 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 GLULP15104 373 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 CHRNB2P17787 502 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 GBP1P32455 592 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 RING1Q06587 406 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 TBX2Q13207 712 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 PDGFRLQ15198 375 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 C10orf120Q5SQS8 335 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 NAA35Q5VZE5 725 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 ACAD10Q6JQN1 1059 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 MSANTD2Q6P1R3 559 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 TMC6Q7Z403 805 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 SCD5Q86SK9 330 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 PASD1Q8IV76 773 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC44A3Q8N4M1 653 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 ARL14EPQ8N8R7 260 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 ZSWIM3Q96MP5 696 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 SERPINB11Q96P15 392 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 SYT11Q9BT88 431 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 ABHD10Q9NUJ1 306 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 SEPT11Q9NVA2 429 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 ADAM22Q9P0K1 906 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 STAP1Q9ULZ2 295 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 NUMBLQ9Y6R0 609 aa12.62□□□□□ -0.39
RABGGTA-215ENST00000560207 XIRP2A4UGR9 3374 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 C2orf78A6NCI8 922 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 YJEFN3A6XGL0 299 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 HEPACAM2A8MVW5 462 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 E7ENQ6 273 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 ZNF263O14978 683 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 PAPSS1O43252 624 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 LATS1O95835 1130 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 F9P00740 461 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 FCARP24071 287 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 NOS2P35228 1153 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 NR1H3Q13133 447 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 PTPN20Q4JDL3 420 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 HGSNATQ68CP4 663 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 OR6B2Q6IFH4 312 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 PARM1Q6UWI2 310 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 UNC45BQ8IWX7 931 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 SLC20A1Q8WUM9 679 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 FGF14Q92915 247 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 USP13Q92995 863 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 AZIN2Q96A70 460 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 FAM149B1Q96BN6 582 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 PLD4Q96BZ4 506 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 SHDQ96IW2 340 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 PANX2Q96RD6 677 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 NCAPGQ9BPX3 1015 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 DEF6Q9H4E7 631 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 MRPL47Q9HD33 250 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 MARCH2Q9P0N8 246 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 CYTH4Q9UIA0 394 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 LCMT1Q9UIC8 334 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 DUSP12Q9UNI6 340 aa12.61□□□□□ -0.39
RABGGTA-215ENST00000560207 SH3BP1Q9Y3L3 701 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms