RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 EIF2DP41214 584 aaKnown RBP13.89□□□□□ -0.19
SMAD3-213ENST00000560175 CCR3P51677 355 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 TKTL1P51854 596 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 GRSF1Q12849 480 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMAD3-213ENST00000560175 DHCR24Q15392 516 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 FBXO43Q4G163 708 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 ALYREFQ86V81 257 aaKnown RBP13.89□□□□□ -0.19
SMAD3-213ENST00000560175 ARHGAP18Q8N392 663 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 UBA3Q8TBC4 463 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 SHC3Q92529 594 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 CD101Q93033 1021 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 EXOC4Q96A65 974 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 HSFY1Q96LI6 401 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 CDK5RAP1Q96SZ6 601 aaKnown RBP13.89□□□□□ -0.19
SMAD3-213ENST00000560175 P2RY13Q9BPV8 354 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 TUBGCP2Q9BSJ2 902 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 CRACR2AQ9BSW2 395 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 NDST4Q9H3R1 872 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 SIX2Q9NPC8 291 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 SAMSN1Q9NSI8 373 aaKnown RBP13.89□□□□□ -0.19
SMAD3-213ENST00000560175 APEX2Q9UBZ4 518 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 DNMT3LQ9UJW3 386 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 FAM186AA6NE01 2351 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 MYO18AQ92614 2054 aaKnown RBP13.88□□□□□ -0.19
SMAD3-213ENST00000560175 BECN2A8MW95 431 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 MBD3O95983 291 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 CHRM1P11229 460 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-213ENST00000560175 RALAP11233 206 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 EEF1GP26641 437 aaKnown RBP13.88□□□□□ -0.19
SMAD3-213ENST00000560175 GPD2P43304 727 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 MTIF2P46199 727 aaKnown RBP13.88□□□□□ -0.19
SMAD3-213ENST00000560175 CXCL12P48061 93 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 MFAP3P55082 362 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 KCNMA1Q12791 1236 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 TPD52L1Q16890 204 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-213ENST00000560175 VWA3BQ502W6 1294 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 TCP11X2Q5H9J9 407 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 CDKAL1Q5VV42 579 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 NAIF1Q69YI7 327 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-213ENST00000560175 PMF1Q6P1K2 205 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 Q6ZNB5 142 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 Q6ZS52 159 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 TADA2BQ86TJ2 420 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 STK32AQ8WU08 396 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 ULBP1Q9BZM6 244 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 CNGB3Q9NQW8 809 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 NAGPAQ9UK23 515 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 PCDHGA2Q9Y5H1 932 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 WDR87Q6ZQQ6 2873 aa13.88□□□□□ -0.19
SMAD3-213ENST00000560175 K7ESF4 209 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 HOXC11O43248 304 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-213ENST00000560175 EGFP01133 1207 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 BRD2P25440 801 aaKnown RBP13.87□□□□□ -0.19
SMAD3-213ENST00000560175 DAOAP59103 153 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 YWHAGP61981 247 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMAD3-213ENST00000560175 COG7P83436 770 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 CSTF1Q05048 431 aaKnown RBP13.87□□□□□ -0.19
SMAD3-213ENST00000560175 C10orf120Q5SQS8 335 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 GJB7Q6PEY0 223 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 BBS7Q8IWZ6 715 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 ETFBKMTQ8IXQ9 262 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 PHTF2Q8N3S3 785 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 ZNF606Q8WXB4 792 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 IRGQQ8WZA9 623 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 LRRC4Q9HBW1 653 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 C2orf42Q9NWW7 574 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 ZSCAN32Q9NX65 697 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 NUDT5Q9UKK9 219 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 SH3BP1Q9Y3L3 701 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 OTOGLQ3ZCN5 2332 aa13.87□□□□□ -0.19
SMAD3-213ENST00000560175 PTPRZ1P23471 2315 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-213ENST00000560175 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 LRRC10BA6NIK2 292 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 YJEFN3A6XGL0 299 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 KCNJ18B7U540 433 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 E7ENQ6 273 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 K7EQS6 105 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 STC2O76061 302 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 ADH1CP00326 375 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 CALCAP01258 141 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 KLKB1P03952 638 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 NRLP54845 237 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 SATB1Q01826 763 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 APBA1Q02410 837 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 ADIGQ0VDE8 80 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 KCNJ12Q14500 433 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 LY6G5CQ5SRR4 150 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 BSPRYQ5W0U4 402 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 PKN3Q6P5Z2 889 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 ZC3H14Q6PJT7 736 aaKnown RBP13.86□□□□□ -0.19
SMAD3-213ENST00000560175 ASCL5Q7RTU5 278 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 CREBRFQ8IUR6 639 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 NDRG1Q92597 394 aaKnown RBP13.86□□□□□ -0.19
SMAD3-213ENST00000560175 SECISBP2LQ93073 1101 aaKnown RBP13.86□□□□□ -0.19
SMAD3-213ENST00000560175 NKD2Q969F2 451 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-213ENST00000560175 SLC4A5Q9BY07 1137 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 SPHK2Q9NRA0 654 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 ANO10Q9NW15 660 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 MARK1Q9P0L2 795 aa13.86□□□□□ -0.19
SMAD3-213ENST00000560175 NFE2L3Q9Y4A8 694 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms