RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 APEX2Q9UBZ4 518 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 SYNJ1O43426 1573 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 TRIM66O15016 1216 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ADORA1P30542 326 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 NME5P56597 212 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 C4orf46Q504U0 113 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 FGD3Q5JSP0 725 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 AGMOQ6ZNB7 445 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ATG14Q6ZNE5 492 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 R3HCC1LQ7Z5L2 792 aaKnown RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ADAM33Q9BZ11 813 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 TMEM117Q9H0C3 514 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 DDX18Q9NVP1 670 aaKnown RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 NCF1BA6NI72 391 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 NCF1CA8MVU1 366 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 RNASEH1O60930 286 aaKnown RBP14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 IL18RAPO95256 599 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 NCF1P14598 390 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 MYL9P24844 172 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 BIKQ13323 160 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 PACS1Q6VY07 963 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 ARHGEF19Q8IW93 802 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 PHACTR4Q8IZ21 702 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 GPN1Q9HCN4 374 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 KCNH4Q9UQ05 1017 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 GSAPA4D1B5 854 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 SCTRP47872 440 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 DNAJC3Q13217 504 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 MPP2Q14168 576 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 PTGISQ16647 500 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZSCAN18Q8TBC5 510 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 STARD8Q92502 1023 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZNF669Q96BR6 464 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 NFKBIZQ9BYH8 718 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 PGK1P00558 417 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 NR3C2P08235 984 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 GEMP55040 296 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 ATP6V0D2Q8N8Y2 350 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 PIF1Q9H611 641 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 C12orf4Q9NQ89 552 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 ACSL4O60488 711 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 ALDH9A1P49189 494 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 RASA2Q15283 850 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 FNIP1Q8TF40 1166 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 PROX1Q92786 737 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 Q96MT0 163 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 CLN6Q9NWW5 311 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 RB1P06400 928 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 TBCDQ9BTW9 1192 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 O00370 1275 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 TRIM3O75382 744 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 GPD1P21695 349 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 S100A2P29034 98 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 EZH2Q15910 746 aaKnown RBP14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 SLC18A3Q16572 532 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 C1orf189Q5VU69 101 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 TTC27Q6P3X3 843 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 HPS6Q86YV9 775 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 COX4I2Q96KJ9 171 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 CCDC28BQ9BUN5 200 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 RASSF1Q9NS23 344 aa14.24□□□□□ -0.13
CSPG4P12-202ENST00000559989 SLC30A5Q8TAD4 765 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 ACTRT2Q8TDY3 377 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 RIN2Q8WYP3 895 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 EAF2Q96CJ1 260 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 SEPT5Q99719 369 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 LXNQ9BS40 222 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 GSDMCQ9BYG8 508 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 ELL3Q9HB65 397 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 GPC6Q9Y625 555 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZNF432O94892 652 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 NCAM1P13591 858 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 LIFRP42702 1097 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 TAF5Q15542 800 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 LGR6Q9HBX8 967 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZNF232Q9UNY5 417 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 SKP1P63208 163 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 CCNJLQ8IV13 435 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 C2orf69Q8N8R5 385 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 SMYD1Q8NB12 490 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 OR52L1Q8NGH7 329 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 NSMCE2Q96MF7 247 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 CLPBQ9H078 707 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 SENP2Q9HC62 589 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 AP3M1Q9Y2T2 418 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 MYOM2P54296 1465 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 A0A087WXM4 84 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 HAT1O14929 419 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 STAU1O95793 577 aaKnown RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 CYP20A1Q6UW02 462 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 C9orf72Q96LT7 481 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 SLC4A9Q96Q91 983 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 EIF2AK1Q9BQI3 630 aaKnown RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 MTIF3Q9H2K0 278 aaKnown RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 KIF28PB7ZC32 967 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 PBLDP30039 288 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 TOMM20Q15388 145 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 MIIPQ5JXC2 388 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms