RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 KCNV2Q8TDN2 545 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 N4BP2L2Q92802 583 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-216ENST00000559819 FAXDC2Q96IV6 333 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 LRMDAQ9H2I8 198 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 POPDC2Q9HBU9 364 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 ETNK2Q9NVF9 386 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 PAK5Q9P286 719 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 ZFP69BQ9UJL9 534 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 C2CD2Q9Y426 696 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 IKBKGQ9Y6K9 419 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 A0A1B0GUA9 196 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 TRIM49D1C9J1S8 452 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 TM9SF1O15321 606 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 ECM2O94769 699 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-216ENST00000559819 METTL18O95568 372 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 APRTP07741 180 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 CCDC130P13994 396 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 ADORA2AP29274 412 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 ADORA2BP29275 332 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 EPHB2P29323 1055 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 SLC6A3Q01959 620 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 GBE1Q04446 702 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 GRIK4Q16099 956 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 FYB2Q5VWT5 728 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 TLDC1Q6P9B6 456 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 LONP2Q86WA8 852 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 KIRREL3Q8IZU9 778 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 MPP5Q8N3R9 675 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 APOPT1Q96IL0 206 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 TACO1Q9BSH4 297 aaKnown RBP10.44□□□□□ -0.74
LRRC28-216ENST00000559819 APOL6Q9BWW8 343 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 FAM49AQ9H0Q0 323 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-216ENST00000559819 EBF2Q9HAK2 575 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 CDHR5Q9HBB8 845 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 H3BRB1 525 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 SMAPO00193 183 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 DPYSL4O14531 572 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 DIAPH2O60879 1101 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 PDGFRBP09619 1106 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 NEFHP12036 1026 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 CYP2F1P24903 491 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 ETV4P43268 484 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 SLC10A2Q12908 348 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-216ENST00000559819 SLC9A4Q6AI14 798 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 MAP7D3Q8IWC1 876 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 OR6B3Q8NGW1 331 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 NSMCE1Q8WV22 266 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 MECRQ9BV79 373 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 TSSK1BQ9BXA7 367 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 SLC4A5Q9BY07 1137 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 DHX35Q9H5Z1 703 aaKnown RBP10.43□□□□□ -0.74
LRRC28-216ENST00000559819 TUT1Q9H6E5 874 aaKnown RBP10.43□□□□□ -0.74
LRRC28-216ENST00000559819 SETD4Q9NVD3 440 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 NKX1-2Q9UD57 310 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-216ENST00000559819 ZC3H7BQ9UGR2 993 aaKnown RBP10.43□□□□□ -0.74
LRRC28-216ENST00000559819 C2CD2LO14523 706 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 LCP1P13796 627 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 TSHRP16473 764 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 TGM2P21980 687 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 GRM5P41594 1212 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 GRIA1P42261 906 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 SLC18A2Q05940 514 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 PDK2Q15119 407 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 ZNF792Q3KQV3 632 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 BOLA3Q53S33 107 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 PPTC7Q8NI37 304 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 SLC35F5Q8WV83 523 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 ALKBH8Q96BT7 664 aaKnown RBP10.43□□□□□ -0.74
LRRC28-216ENST00000559819 RAB3IPQ96QF0 476 aaPredicted RBP10.43□□□□□ -0.74
LRRC28-216ENST00000559819 TBC1D10AQ9BXI6 508 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 RNF181Q9P0P0 153 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 C15orf41Q9Y2V0 281 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 SCN1AP35498 2009 aa10.43□□□□□ -0.74
LRRC28-216ENST00000559819 STAU1O95793 577 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 DHRS4L1P0CG22 281 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CSH1P0DML2 217 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CSH2P0DML3 217 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TROVE2P10155 538 aaKnown RBP eCLIP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CCND1P24385 295 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 HOXA11P31270 313 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SMAD1Q15797 465 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SOWAHAQ2M3V2 549 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 ZNF618Q5T7W0 954 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TRMT10BQ6PF06 316 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 ZNF534Q76KX8 674 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 FASTKD5Q7L8L6 764 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TMEM110Q86TL2 294 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 FAM13CQ8NE31 585 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 NDRG1Q92597 394 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 KCTD15Q96SI1 283 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TMEM120AQ9BXJ8 343 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 VPS11Q9H270 941 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 NRDE2Q9H7Z3 1164 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 YY1AP1Q9H869 796 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 FBXO6Q9NRD1 293 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 HEY2Q9UBP5 337 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 KIAA1257Q9ULG3 409 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 ZSWIM8A7E2V4 1837 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CCDC195A0A1B0GUA6 201 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms