RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 PCDHA5Q9Y5H7 936 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 HHLA1C9JL84 531 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 CILPO75339 1184 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 TBX18O95935 607 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 ACO1P21399 889 aaKnown RBP15.76■□□□□ 0.11
LRRC28-213ENST00000559399 BCKDHBP21953 392 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 GTF2H1P32780 548 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 ATP5C1P36542 298 aaKnown RBP15.76■□□□□ 0.11
LRRC28-213ENST00000559399 ADAM9Q13443 819 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 EMC10Q5UCC4 262 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 RNF43Q68DV7 783 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 NUDT18Q6ZVK8 323 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 HTR3DQ70Z44 454 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 TRMT11Q7Z4G4 463 aaKnown RBP15.76■□□□□ 0.11
LRRC28-213ENST00000559399 TMEM25Q86YD3 366 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 KCNV2Q8TDN2 545 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 WBP2Q969T9 261 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 SPACA7Q96KW9 195 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 EDEM2Q9BV94 578 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 KLF16Q9BXK1 252 aaPredicted RBP15.76■□□□□ 0.11
LRRC28-213ENST00000559399 DENND4CQ5VZ89 1909 aa15.76■□□□□ 0.11
LRRC28-213ENST00000559399 TM4SF5O14894 197 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 GREM1O60565 184 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 ADAM23O75077 832 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 ZNF202O95125 648 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 C10orf76Q5T2E6 689 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 KRT39Q6A163 491 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 GRAMD4Q6IC98 578 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 KLHDC10Q6PID8 442 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 CYP2U1Q7Z449 544 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 TADA2BQ86TJ2 420 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 ZNF513Q8N8E2 541 aaPredicted RBP15.75■□□□□ 0.11
LRRC28-213ENST00000559399 TERB1Q8NA31 727 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 OLIG1Q8TAK6 271 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 NMUR1Q9HB89 426 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 ZDHHC4Q9NPG8 344 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 OSER1Q9NX31 292 aa15.75■□□□□ 0.11
LRRC28-213ENST00000559399 CIZ1Q9ULV3 898 aaPredicted RBP15.75■□□□□ 0.11
LRRC28-213ENST00000559399 A0A1W2PQH9 124 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 TCRBV21S2A2A0A5A6 115 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 NEDD8-MDP1E9PL57 170 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 RARGP13631 454 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 P2RY2P41231 377 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 MXI1P50539 228 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 TTC39CQ8N584 583 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 HMGB4Q8WW32 186 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 FAXDC2Q96IV6 333 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 DUSP16Q9BY84 665 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 DNAJC17Q9NVM6 304 aaKnown RBP15.74■□□□□ 0.11
LRRC28-213ENST00000559399 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.74■□□□□ 0.11
LRRC28-213ENST00000559399 MARK1Q9P0L2 795 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 DNMT3LQ9UJW3 386 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 NAGPAQ9UK23 515 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 PTPRDP23468 1912 aa15.74■□□□□ 0.11
LRRC28-213ENST00000559399 LNP1A1A4G5 178 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 KHNYNO15037 678 aaKnown RBP15.73■□□□□ 0.11
LRRC28-213ENST00000559399 CETN3O15182 167 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 CACNG3O60359 315 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 STX10O60499 249 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 EPB41P11171 864 aaKnown RBP15.73■□□□□ 0.11
LRRC28-213ENST00000559399 DHPSP49366 369 aaPredicted RBP15.73■□□□□ 0.11
LRRC28-213ENST00000559399 PSEN1P49768 467 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 KIF11P52732 1056 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 MCCD1P59942 119 aaPredicted RBP15.73■□□□□ 0.11
LRRC28-213ENST00000559399 BYSLQ13895 437 aaKnown RBP15.73■□□□□ 0.11
LRRC28-213ENST00000559399 ZNF394Q53GI3 561 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 C10orf120Q5SQS8 335 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 PPP1R26Q5T8A7 1209 aaPredicted RBP15.73■□□□□ 0.11
LRRC28-213ENST00000559399 LPCAT2Q7L5N7 544 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 CCDC186Q7Z3E2 898 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 SMYD4Q8IYR2 804 aaPredicted RBP15.73■□□□□ 0.11
LRRC28-213ENST00000559399 PGBD3Q8N328 593 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 FBXL13Q8NEE6 735 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 RLN3Q8WXF3 142 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 SEMA4DQ92854 862 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 EEF2KMTQ96G04 330 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 XPO6Q96QU8 1125 aaKnown RBP15.73■□□□□ 0.11
LRRC28-213ENST00000559399 LSM14BQ9BX40 385 aaKnown RBP15.73■□□□□ 0.11
LRRC28-213ENST00000559399 BBS2Q9BXC9 721 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 GDPD2Q9HCC8 539 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 RMND1Q9NWS8 449 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 WDR35Q9P2L0 1181 aa15.73■□□□□ 0.11
LRRC28-213ENST00000559399 GREB1Q4ZG55 1949 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 MDM4O15151 490 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 TRIM24O15164 1050 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 MAP3K13O43283 966 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 RALAP11233 206 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 HOXB2P14652 356 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 TYRP14679 529 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 PLA2G4AP47712 749 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 MAP7D1Q3KQU3 841 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 TPGS1Q6ZTW0 290 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 MIB1Q86YT6 1006 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 HEXIM2Q96MH2 286 aaKnown RBP15.72■□□□□ 0.11
LRRC28-213ENST00000559399 CDK5RAP1Q96SZ6 601 aaKnown RBP15.72■□□□□ 0.11
LRRC28-213ENST00000559399 CISHQ9NSE2 258 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 RAB20Q9NX57 234 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 CLIC5Q9NZA1 410 aa15.72■□□□□ 0.11
LRRC28-213ENST00000559399 NUDT5Q9UKK9 219 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms