RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 NECTIN4Q96NY8 510 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 PACSIN1Q9BY11 444 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 TLR8Q9NR97 1041 aaKnown RBP15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 CHORDC1Q9UHD1 332 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 ZMYM5Q9UJ78 669 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 USP15Q9Y4E8 981 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 TMCO5BA8MYB1 307 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 ZNF197O14709 1029 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 HSF2BPO75031 334 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 MTA2O94776 668 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 LTFP02788 710 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 BMP1P13497 986 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 DDX6P26196 483 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 HADHBP55084 474 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 YWHAGP61981 247 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 YWHAZP63104 245 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 MAMLD1Q13495 774 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 ATAT1Q5SQI0 421 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 OTUD1Q5VV17 481 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 BSPRYQ5W0U4 402 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 CES5AQ6NT32 575 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 TOGARAM2Q6ZUX3 1019 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 PDZD4Q76G19 769 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 ITFG1Q8TB96 612 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 ARHGEF26Q96DR7 871 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 RIPOR3Q96MK2 946 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 DDX23Q9BUQ8 820 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 ADAM33Q9BZ11 813 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 THAP2Q9H0W7 228 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 DEF6Q9H4E7 631 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 POMKQ9H5K3 350 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 POPDC2Q9HBU9 364 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 ABCC13Q9NSE7 274 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 SEPT11Q9NVA2 429 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 TRPM5Q9NZQ8 1165 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 MAGED2Q9UNF1 606 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 ADGRG1Q9Y653 693 aa15.52■□□□□ 0.08
SNRPA1-207ENST00000559309 A0A1W2PRU2 124 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 RCCD1A6NED2 376 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 C2CD4BA6NLJ0 364 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 BTNL10A8MVZ5 291 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 H3BQ06 376 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 DAB1O75553 588 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 ENDOD1O94919 500 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 H2AFZP0C0S5 128 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 TCF3P15923 654 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 CEBPBP17676 345 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 KCNA5P22460 613 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 FLT3P36888 993 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 CBX2Q14781 532 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 SMAD2Q15796 467 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 OR6B2Q6IFH4 312 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 ZNF662Q6ZS27 426 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 H2AFVQ71UI9 128 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 NPAS3Q8IXF0 933 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 FNIP1Q8TF40 1166 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 PGAP3Q96FM1 320 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 ZFRQ96KR1 1074 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 SLC46A2Q9BY10 475 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 TRPV4Q9HBA0 871 aa15.51■□□□□ 0.07
SNRPA1-207ENST00000559309 C2orf78A6NCI8 922 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 TMEM191CA6NGB0 347 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 DPYSL4O14531 572 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 MYL4P12829 197 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 FSHRP23945 695 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 RFC1P35251 1148 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 GPC5P78333 572 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 SLC7A9P82251 487 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 ZXDBP98169 803 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 CYP4F8P98187 520 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 TEAD2Q15562 447 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 AAK1Q2M2I8 961 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 STXBP5Q5T5C0 1151 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 FAM102AQ5T9C2 384 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 SYPL2Q5VXT5 272 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 ACRBPQ8NEB7 543 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 JOSD2Q8TAC2 188 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 CENPIQ92674 756 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 SLC22A12Q96S37 553 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 NPY6RQ99463 290 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 TRIM62Q9BVG3 475 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 APOL5Q9BWW9 433 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 RNF38Q9H0F5 515 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 TASP1Q9H6P5 420 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 CCSER2Q9H7U1 834 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 PIDD1Q9HB75 910 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 PARVAQ9NVD7 372 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 GDE1Q9NZC3 331 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 CNOT8Q9UFF9 292 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 USTQ9Y2C2 406 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 PCDHA13Q9Y5I0 950 aa15.5■□□□□ 0.07
SNRPA1-207ENST00000559309 A0A0A6YYK5 440 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 ATMINO43313 823 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 COCHO43405 550 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 GREM1O60565 184 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 TLR5O60602 858 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 RARGP13631 454 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 GJA1P17302 382 aa15.49■□□□□ 0.07
SNRPA1-207ENST00000559309 NOS2P35228 1153 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms