RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 PTPRN2Q92932 1015 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 HPDLQ96IR7 371 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 B3GNT5Q9BYG0 378 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 CLIC5Q9NZA1 410 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 TCRBV7S3A2A0A539 114 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 SIGLEC16A6NMB1 481 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 KCNN4O15554 427 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 CCDC22O60826 627 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 ZNF189O75820 626 aaPredicted RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 CRADDP78560 199 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 SIX1Q15475 284 aaPredicted RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 CHI3L2Q15782 390 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 BRSK2Q8IWQ3 736 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 NME8Q8N427 588 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 MTMR14Q8NCE2 650 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 CCNYQ8ND76 341 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 UNKQ9C0B0 810 aaKnown RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 DHX35Q9H5Z1 703 aaKnown RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 MAGEA13PA6NCF6 341 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 BHMG1C9JSJ3 638 aaPredicted RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 GPR25O00155 361 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 SUPT3HO75486 399 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 ELK3P41970 407 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 RABGAP1LQ5R372 815 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 CEP128Q6ZU80 1094 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 CLNKQ7Z7G1 428 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 RCOR2Q8IZ40 523 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 RIBC1Q8N443 379 aaPredicted RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 CHST13Q8NET6 341 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 NDRG1Q92597 394 aaKnown RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 LENG1Q96BZ8 264 aaPredicted RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 SLC10A4Q96EP9 437 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 FBXL18Q96ME1 805 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 SLITRK1Q96PX8 696 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 ACO2Q99798 780 aaKnown RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 ST6GALNAC4Q9H4F1 302 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 DDX18Q9NVP1 670 aaKnown RBP12.61□□□□□ -0.39
SEC11A-206ENST00000558924 PHF24Q9UPV7 400 aa12.61□□□□□ -0.39
SEC11A-206ENST00000558924 FCHO1O14526 889 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 ACO1P21399 889 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 PTPN4P29074 926 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 GEMIN4P57678 1058 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 PTK6Q13882 451 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 RASA2Q15283 850 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 CCNG2Q16589 344 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 KBTBD12Q3ZCT8 623 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 TFDP3Q5H9I0 405 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 FNBP1LQ5T0N5 605 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 IER5Q5VY09 327 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 IRGCQ6NXR0 463 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 NUDCD3Q8IVD9 361 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 UNC45BQ8IWX7 931 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 GRAMD1AQ96CP6 724 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 NSL1Q96IY1 281 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 CADM1Q9BY67 442 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 NMUR2Q9GZQ4 415 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 SETD4Q9NVD3 440 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 CACNG4Q9UBN1 327 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 PRRC2BQ5JSZ5 2229 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 EDF1O60869 148 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 ASS1P00966 412 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 GMPRP36959 345 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 EFNA5P52803 228 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 AQP5P55064 265 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 ZNF280AP59817 542 aaPredicted RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 TTLL4Q14679 1199 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 PLEKHG4Q58EX7 1191 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 TCHHL1Q5QJ38 904 aaPredicted RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 NXNQ6DKJ4 435 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 MFSD5Q6N075 450 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 XRRA1Q6P2D8 792 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 RINLQ6ZS11 566 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 RASSF3Q86WH2 238 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 CDT1Q9H211 546 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 MAP3K20Q9NYL2 800 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 HESX1Q9UBX0 185 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 PGAP2Q9UHJ9 254 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 TDRKHQ9Y2W6 561 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 SNCAIPQ9Y6H5 919 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 E5RJQ4 531 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 NEMP1O14524 444 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 STBD1O95210 358 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 FGFR1P11362 822 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 MMP8P22894 467 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 IL1R2P27930 398 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 MIPP30301 263 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 VHLP40337 213 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 NDST1P52848 882 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 SLC25A3Q00325 362 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 MPP3Q13368 585 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 UBAP2LQ14157 1087 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 MPZL3Q6UWV2 235 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 TRIM72Q6ZMU5 477 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 ATP11CQ8NB49 1132 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 EXD1Q8NHP7 514 aa12.6□□□□□ -0.39
SEC11A-206ENST00000558924 PIWIL1Q96J94 861 aaKnown RBP12.6□□□□□ -0.39
SEC11A-206ENST00000558924 MAGEB5Q9BZ81 275 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 238.2 ms