RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 C11orf74Q86VG3 221 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 FAM186BQ8IYM0 893 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 CCDC26Q8TAB7 109 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 ACDQ96AP0 544 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 EEF2KMTQ96G04 330 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 FAM49BQ9NUQ9 324 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 OSER1Q9NX31 292 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 INVSQ9Y283 1065 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 ATP6V1DQ9Y5K8 247 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 MYOFQ9NZM1 2061 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
CASC4-205ENST00000558735 GREM1O60565 184 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 KAT7O95251 611 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 ADH5P11766 374 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 KRT13P13646 458 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 EIF2DP41214 584 aaKnown RBP12.17□□□□□ -0.46
CASC4-205ENST00000558735 GRIA2P42262 883 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 KIR2DL1P43626 348 aaPredicted RBP12.17□□□□□ -0.46
CASC4-205ENST00000558735 DGKEP52429 567 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 GAD2Q05329 585 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 CRY1Q16526 586 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 SH3PXD2AQ5TCZ1 1133 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 LRSAM1Q6UWE0 723 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 CLEC20AQ6ZU45 233 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 HTR3DQ70Z44 454 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 TMEM25Q86YD3 366 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 BBS7Q8IWZ6 715 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 SMYD4Q8IYR2 804 aaPredicted RBP12.17□□□□□ -0.46
CASC4-205ENST00000558735 PHTF2Q8N3S3 785 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 NAT16Q8N8M0 369 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 IL17RCQ8NAC3 791 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 SEMA4DQ92854 862 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 OTUB2Q96DC9 234 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 DUSP9Q99956 384 aaKnown RBP12.17□□□□□ -0.46
CASC4-205ENST00000558735 NT5C1AQ9BXI3 368 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 KLF16Q9BXK1 252 aaPredicted RBP12.17□□□□□ -0.46
CASC4-205ENST00000558735 FBXO44Q9H4M3 255 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 MMP17Q9ULZ9 603 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 SCML2Q9UQR0 700 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 EML5Q05BV3 1969 aa12.17□□□□□ -0.46
CASC4-205ENST00000558735 CDX4O14627 284 aaPredicted RBP12.16□□□□□ -0.46
CASC4-205ENST00000558735 TLR5O60602 858 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 CILPO75339 1184 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 ADH1CP00326 375 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 APODP05090 189 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 FAM200BP0CF97 657 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 ACO1P21399 889 aaKnown RBP12.16□□□□□ -0.46
CASC4-205ENST00000558735 GTF2H1P32780 548 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 TIE1P35590 1138 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 TNFRSF4P43489 277 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 FOXC1Q12948 553 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 PNOCQ13519 176 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 EDRF1Q3B7T1 1238 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 RASSF3Q86WH2 238 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 ETFBKMTQ8IXQ9 262 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 ALLCQ8N6M5 410 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 TXNDC5Q8NBS9 432 aaKnown RBP12.16□□□□□ -0.46
CASC4-205ENST00000558735 TSTD1Q8NFU3 115 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 TATDN2Q93075 761 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 IMPG2Q9BZV3 1241 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 MMRN2Q9H8L6 949 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 NMUR1Q9HB89 426 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 TMEM8AQ9HCN3 771 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 ZDHHC4Q9NPG8 344 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 ARHGEF4Q9NR80 690 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 TLR8Q9NR97 1041 aaKnown RBP12.16□□□□□ -0.46
CASC4-205ENST00000558735 SPHK2Q9NRA0 654 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 SH3BP1Q9Y3L3 701 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 NEUROG3Q9Y4Z2 214 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 LOC400499M0QZD8 3231 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 ABCA7Q8IZY2 2146 aa12.16□□□□□ -0.46
CASC4-205ENST00000558735 SGK1O00141 431 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 TRIM24O15164 1050 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 HOXC11O43248 304 aaPredicted RBP12.15□□□□□ -0.46
CASC4-205ENST00000558735 ADAM23O75077 832 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 TULP3O75386 442 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 KLF8O95600 359 aaPredicted RBP12.15□□□□□ -0.46
CASC4-205ENST00000558735 IRF1P10914 325 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 CD58P19256 250 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 ATP5C1P36542 298 aaKnown RBP12.15□□□□□ -0.46
CASC4-205ENST00000558735 PRCPP42785 496 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 KIF11P52732 1056 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 CREB5Q02930 508 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 ZNF394Q53GI3 561 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 USP39Q53GS9 565 aaKnown RBP12.15□□□□□ -0.46
CASC4-205ENST00000558735 PPP1R26Q5T8A7 1209 aaPredicted RBP12.15□□□□□ -0.46
CASC4-205ENST00000558735 PMS2CLQ68D20 193 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 KRT39Q6A163 491 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 ANO7Q6IWH7 933 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 SCD5Q86SK9 330 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 FMR1NBQ8N0W7 255 aaPredicted RBP12.15□□□□□ -0.46
CASC4-205ENST00000558735 JAKMIP2Q96AA8 810 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 HEXIM2Q96MH2 286 aaKnown RBP12.15□□□□□ -0.46
CASC4-205ENST00000558735 SCNM1Q9BWG6 230 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 DUSP16Q9BY84 665 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 TPSD1Q9BZJ3 242 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 NIF3L1Q9GZT8 377 aa12.15□□□□□ -0.46
CASC4-205ENST00000558735 TMEM9BQ9NQ34 198 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms